Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 KRT18P28-201ENST00000453838 1332 ntBASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ECHDC3Q96DC8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ECHDC3Q96DC8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
ECHDC3Q96DC8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.53■□□□□ 0.24
ECHDC3Q96DC8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ECHDC3Q96DC8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
ECHDC3Q96DC8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ECHDC3Q96DC8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.53■□□□□ 0.24
ECHDC3Q96DC8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms