Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ARRDC3Q96B67 UBALD1-205ENST00000590891 2641 ntBASIC16.49■□□□□ 0.23
ARRDC3Q96B67 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 AC092580.3-201ENST00000430932 139 ntBASIC16.49■□□□□ 0.23
ARRDC3Q96B67 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 AC097493.3-201ENST00000509725 367 ntBASIC16.49■□□□□ 0.23
ARRDC3Q96B67 RNA5SP410-201ENST00000516285 106 ntBASIC16.49■□□□□ 0.23
ARRDC3Q96B67 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 IGHV3-42-201ENST00000520410 361 ntBASIC16.49■□□□□ 0.23
ARRDC3Q96B67 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.49■□□□□ 0.23
ARRDC3Q96B67 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 AC022211.2-201ENST00000585075 2527 ntBASIC16.48■□□□□ 0.23
ARRDC3Q96B67 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 AL158211.3-201ENST00000607385 239 ntBASIC16.48■□□□□ 0.23
ARRDC3Q96B67 AC007967.4-201ENST00000614700 386 ntBASIC16.48■□□□□ 0.23
ARRDC3Q96B67 AL390754.1-201ENST00000619088 582 ntBASIC16.48■□□□□ 0.23
ARRDC3Q96B67 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ARRDC3Q96B67 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 GGT3P-204ENST00000453783 1664 ntBASIC16.47■□□□□ 0.23
ARRDC3Q96B67 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.47■□□□□ 0.23
ARRDC3Q96B67 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms