Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.83■□□□□ 0.44
SEMA4DQ92854 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SEMA4DQ92854 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SEMA4DQ92854 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.83■□□□□ 0.44
SEMA4DQ92854 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SEMA4DQ92854 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SEMA4DQ92854 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SEMA4DQ92854 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SEMA4DQ92854 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
SEMA4DQ92854 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.82■□□□□ 0.44
SEMA4DQ92854 PMS2P7-201ENST00000506558 1336 ntBASIC17.82■□□□□ 0.44
SEMA4DQ92854 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.82■□□□□ 0.44
SEMA4DQ92854 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.82■□□□□ 0.44
SEMA4DQ92854 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SEMA4DQ92854 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SEMA4DQ92854 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.82■□□□□ 0.44
SEMA4DQ92854 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.82■□□□□ 0.44
SEMA4DQ92854 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.82■□□□□ 0.44
SEMA4DQ92854 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SEMA4DQ92854 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.82■□□□□ 0.44
SEMA4DQ92854 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SEMA4DQ92854 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 MCCD1P2-201ENST00000423228 335 ntBASIC17.81■□□□□ 0.44
SEMA4DQ92854 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 AL078644.1-201ENST00000609881 752 ntBASIC17.81■□□□□ 0.44
SEMA4DQ92854 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 AC091812.2-201ENST00000619081 385 ntBASIC17.81■□□□□ 0.44
SEMA4DQ92854 AC092902.6-201ENST00000641783 218 ntBASIC17.81■□□□□ 0.44
SEMA4DQ92854 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SEMA4DQ92854 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SEMA4DQ92854 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SEMA4DQ92854 DOC2GP-204ENST00000639052 2548 ntBASIC17.8■□□□□ 0.44
SEMA4DQ92854 CYP2T1P-202ENST00000641596 2535 ntBASIC17.8■□□□□ 0.44
SEMA4DQ92854 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SEMA4DQ92854 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.8■□□□□ 0.44
SEMA4DQ92854 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SEMA4DQ92854 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SEMA4DQ92854 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SEMA4DQ92854 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.8■□□□□ 0.44
SEMA4DQ92854 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SEMA4DQ92854 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SEMA4DQ92854 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SEMA4DQ92854 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SEMA4DQ92854 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
SEMA4DQ92854 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SEMA4DQ92854 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SEMA4DQ92854 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
SEMA4DQ92854 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms