Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC44A1Q8WWI5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 PI4KAP1-204ENST00000612579 1703 ntBASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 AL353732.1-201ENST00000569618 1459 ntBASIC16.67■□□□□ 0.26
SLC44A1Q8WWI5 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 AC107918.2-201ENST00000530817 355 ntBASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC44A1Q8WWI5 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms