Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 RPL8-205ENST00000527914 551 ntTSL 3 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL22A1Q8NFW1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 AL512652.2-201ENST00000625156 1716 ntBASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 Z93015.1-201ENST00000451718 390 ntBASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 RPL13AP25-201ENST00000484130 612 ntBASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 AC022137.2-201ENST00000503482 481 ntBASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 AL031731.1-201ENST00000642131 2094 ntBASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL22A1Q8NFW1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 REEP1-202ENST00000453231 940 ntTSL 2 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 MIR4722-201ENST00000578292 60 ntBASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 METTL26-214ENST00000614890 801 ntTSL 3 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 AL607033.1-201ENST00000623900 1599 ntBASIC21.67■■□□□ 1.06
COL22A1Q8NFW1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 C1QBPP1-201ENST00000400117 770 ntBASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 GGCT-203ENST00000409144 836 ntTSL 2 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 NUS1P3-201ENST00000423502 862 ntBASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 MTX1P1-201ENST00000440904 838 ntBASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 AL591846.1-201ENST00000451736 433 ntBASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 AC134312.5-201ENST00000568031 1313 ntBASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL22A1Q8NFW1 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms