Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUP43Q8NFH3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NUP43Q8NFH3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.57■□□□□ 0.08
NUP43Q8NFH3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.57■□□□□ 0.08
NUP43Q8NFH3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUP43Q8NFH3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUP43Q8NFH3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
NUP43Q8NFH3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUP43Q8NFH3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NUP43Q8NFH3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NUP43Q8NFH3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 PCGF3-213ENST00000620529 1899 ntBASIC15.56■□□□□ 0.08
NUP43Q8NFH3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 AC018695.7-201ENST00000624587 2492 ntBASIC15.56■□□□□ 0.08
NUP43Q8NFH3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
NUP43Q8NFH3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 IGLL3P-201ENST00000412472 434 ntBASIC15.55■□□□□ 0.08
NUP43Q8NFH3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 HCG4B-203ENST00000450128 991 ntBASIC15.55■□□□□ 0.08
NUP43Q8NFH3 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.55■□□□□ 0.08
NUP43Q8NFH3 AC079776.4-201ENST00000511039 504 ntBASIC15.55■□□□□ 0.08
NUP43Q8NFH3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 Z83851.2-201ENST00000609564 659 ntBASIC15.55■□□□□ 0.08
NUP43Q8NFH3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NUP43Q8NFH3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.54■□□□□ 0.08
NUP43Q8NFH3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NUP43Q8NFH3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms