Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 AC023824.1-201ENST00000562945 2975 ntBASIC15.71■□□□□ 0.11
SIMC1Q8NDZ2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SIMC1Q8NDZ2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.71■□□□□ 0.1
SIMC1Q8NDZ2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SIMC1Q8NDZ2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.71■□□□□ 0.1
SIMC1Q8NDZ2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SIMC1Q8NDZ2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SIMC1Q8NDZ2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 PRSS29P-201ENST00000440800 595 ntBASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 FAM185BP-201ENST00000443595 716 ntBASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 AC131009.4-201ENST00000624048 1740 ntBASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 ALOX12P2-203ENST00000570921 1945 ntBASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SIMC1Q8NDZ2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 AC129492.6-201ENST00000611383 1305 ntBASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 KRT18P13-201ENST00000400056 1290 ntBASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 CRYGEP-201ENST00000412192 528 ntBASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 AC018845.2-201ENST00000568326 409 ntBASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 AC139530.3-201ENST00000620344 690 ntBASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 AC010507.1-201ENST00000633895 436 ntBASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SIMC1Q8NDZ2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 319 ms