Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 PRYP5-201ENST00000451909 266 ntBASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 KRT16P4-201ENST00000453883 522 ntBASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 AL358472.4-201ENST00000633140 710 ntBASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCNYL1Q8N7R7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 GGT3P-204ENST00000453783 1664 ntBASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 AL365203.3-201ENST00000609742 2057 ntBASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 AL022326.1-202ENST00000641533 845 ntBASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 TOP3BP1-201ENST00000420768 1380 ntBASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CCNYL1Q8N7R7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.46■□□□□ 0.22
CCNYL1Q8N7R7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CCNYL1Q8N7R7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.46■□□□□ 0.22
CCNYL1Q8N7R7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCNYL1Q8N7R7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CCNYL1Q8N7R7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 NKAPP1-205ENST00000585790 367 ntBASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCNYL1Q8N7R7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms