Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 AC023274.1-201ENST00000418278 595 ntBASIC17.11■□□□□ 0.33
PAF1Q8N7H5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 AC124947.2-201ENST00000547118 1133 ntBASIC17.11■□□□□ 0.33
PAF1Q8N7H5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 AC060834.1-201ENST00000443027 2032 ntBASIC17.11■□□□□ 0.33
PAF1Q8N7H5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 AP001094.4-201ENST00000579008 2176 ntBASIC17.11■□□□□ 0.33
PAF1Q8N7H5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PAF1Q8N7H5 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 PCDHA3-202ENST00000532566 4594 ntBASIC17.1■□□□□ 0.33
PAF1Q8N7H5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 HCG4B-203ENST00000450128 991 ntBASIC17.1■□□□□ 0.33
PAF1Q8N7H5 AC092865.5-201ENST00000545435 363 ntBASIC17.1■□□□□ 0.33
PAF1Q8N7H5 AC040169.1-201ENST00000565382 521 ntBASIC17.1■□□□□ 0.33
PAF1Q8N7H5 AC023141.13-201ENST00000604991 943 ntBASIC17.1■□□□□ 0.33
PAF1Q8N7H5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 AC010507.1-201ENST00000633895 436 ntBASIC17.1■□□□□ 0.33
PAF1Q8N7H5 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.1■□□□□ 0.33
PAF1Q8N7H5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 AC002347.1-201ENST00000569543 541 ntBASIC17.09■□□□□ 0.33
PAF1Q8N7H5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 AP001350.2-201ENST00000625104 1094 ntBASIC17.09■□□□□ 0.33
PAF1Q8N7H5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PAF1Q8N7H5 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PAF1Q8N7H5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PAF1Q8N7H5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PAF1Q8N7H5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PAF1Q8N7H5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PAF1Q8N7H5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PAF1Q8N7H5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PAF1Q8N7H5 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms