Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 AC112191.1-201ENST00000523689 701 ntBASIC13.44□□□□□ -0.26
LINC00311Q8N616 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 AP002472.1-201ENST00000577490 586 ntBASIC13.44□□□□□ -0.26
LINC00311Q8N616 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 WASH6P-202ENST00000359512 1437 ntBASIC13.44□□□□□ -0.26
LINC00311Q8N616 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 U82695.1-201ENST00000635752 1889 ntBASIC13.44□□□□□ -0.26
LINC00311Q8N616 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00311Q8N616 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
LINC00311Q8N616 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 AL513523.2-202ENST00000427283 2040 ntBASIC13.43□□□□□ -0.26
LINC00311Q8N616 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 KRT18P58-201ENST00000527480 1120 ntBASIC13.43□□□□□ -0.26
LINC00311Q8N616 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 AC040169.1-201ENST00000565382 521 ntBASIC13.43□□□□□ -0.26
LINC00311Q8N616 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 AL513190.1-201ENST00000621254 727 ntBASIC13.43□□□□□ -0.26
LINC00311Q8N616 AC005622.1-201ENST00000636801 1703 ntBASIC13.43□□□□□ -0.26
LINC00311Q8N616 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 AC006449.6-201ENST00000612330 2296 ntBASIC13.43□□□□□ -0.26
LINC00311Q8N616 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 AL592424.1-201ENST00000563624 1536 ntBASIC13.43□□□□□ -0.26
LINC00311Q8N616 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LINC00311Q8N616 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00311Q8N616 AC005052.1-201ENST00000625181 2492 ntBASIC13.42□□□□□ -0.26
LINC00311Q8N616 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00311Q8N616 AC092919.2-201ENST00000623631 1645 ntBASIC13.42□□□□□ -0.26
LINC00311Q8N616 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00311Q8N616 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00311Q8N616 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00311Q8N616 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00311Q8N616 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00311Q8N616 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LINC00311Q8N616 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00311Q8N616 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00311Q8N616 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms