Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 AL021920.2-201ENST00000624828 1351 ntBASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 AC105020.1-201ENST00000435356 2205 ntBASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 AL591424.1-201ENST00000442569 1213 ntBASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 CXCL1P1-201ENST00000502804 216 ntBASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 AC096734.2-201ENST00000562054 433 ntBASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 AL121761.2-201ENST00000598007 1648 ntBASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 TUBB8P12-201ENST00000308911 1335 ntBASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 TUBB7P-202ENST00000428444 1305 ntBASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 TUBB8P7-204ENST00000567960 1332 ntBASIC13.89□□□□□ -0.19
C11orf42Q8N5U0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 KRT18P3-201ENST00000451602 1288 ntBASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 PGAM5P1-201ENST00000518923 814 ntBASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 KRT18P58-201ENST00000527480 1120 ntBASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 AL645728.1-201ENST00000366221 2101 ntBASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 SLC22A20-204ENST00000530038 1673 ntBASIC13.88□□□□□ -0.19
C11orf42Q8N5U0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms