Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 DUX4L27-201ENST00000554796 1261 ntBASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 AC087641.1-201ENST00000557561 1021 ntBASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 KRT8P23-201ENST00000560090 1207 ntBASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 MPDU1-223ENST00000582151 728 ntBASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 DOC2GP-204ENST00000639052 2548 ntBASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PHTF2Q8N3S3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 AC067863.1-201ENST00000494933 530 ntBASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 AC005915.1-201ENST00000624912 2018 ntBASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHTF2Q8N3S3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 AC069262.1-201ENST00000539058 672 ntBASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 MIR4492-201ENST00000581627 80 ntBASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.15■□□□□ 0.34
PHTF2Q8N3S3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms