Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCML4Q8N228 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCML4Q8N228 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCML4Q8N228 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SCML4Q8N228 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.19■□□□□ 0.34
SCML4Q8N228 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SCML4Q8N228 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SCML4Q8N228 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SCML4Q8N228 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.19■□□□□ 0.34
SCML4Q8N228 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
SCML4Q8N228 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.19■□□□□ 0.34
SCML4Q8N228 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SCML4Q8N228 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SCML4Q8N228 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.19■□□□□ 0.34
SCML4Q8N228 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.19■□□□□ 0.34
SCML4Q8N228 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.19■□□□□ 0.34
SCML4Q8N228 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.19■□□□□ 0.34
SCML4Q8N228 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.19■□□□□ 0.34
SCML4Q8N228 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.19■□□□□ 0.34
SCML4Q8N228 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SCML4Q8N228 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.19■□□□□ 0.34
SCML4Q8N228 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.19■□□□□ 0.34
SCML4Q8N228 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
SCML4Q8N228 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SCML4Q8N228 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SCML4Q8N228 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.19■□□□□ 0.34
SCML4Q8N228 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCML4Q8N228 AC005622.1-201ENST00000636801 1703 ntBASIC17.18■□□□□ 0.34
SCML4Q8N228 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCML4Q8N228 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCML4Q8N228 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SCML4Q8N228 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
SCML4Q8N228 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
SCML4Q8N228 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCML4Q8N228 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
SCML4Q8N228 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCML4Q8N228 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCML4Q8N228 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.18■□□□□ 0.34
SCML4Q8N228 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.18■□□□□ 0.34
SCML4Q8N228 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCML4Q8N228 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCML4Q8N228 AL139400.1-201ENST00000366220 510 ntBASIC17.18■□□□□ 0.34
SCML4Q8N228 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
SCML4Q8N228 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.18■□□□□ 0.34
SCML4Q8N228 TSEN15P1-201ENST00000423257 515 ntBASIC17.18■□□□□ 0.34
SCML4Q8N228 ALG1L8P-201ENST00000533887 760 ntBASIC17.18■□□□□ 0.34
SCML4Q8N228 AC015911.4-201ENST00000588022 1070 ntBASIC17.18■□□□□ 0.34
SCML4Q8N228 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.18■□□□□ 0.34
SCML4Q8N228 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.18■□□□□ 0.34
SCML4Q8N228 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.18■□□□□ 0.34
SCML4Q8N228 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.18■□□□□ 0.34
SCML4Q8N228 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCML4Q8N228 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCML4Q8N228 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCML4Q8N228 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCML4Q8N228 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SCML4Q8N228 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCML4Q8N228 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SCML4Q8N228 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SCML4Q8N228 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SCML4Q8N228 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.17■□□□□ 0.34
SCML4Q8N228 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.17■□□□□ 0.34
SCML4Q8N228 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
SCML4Q8N228 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SCML4Q8N228 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SCML4Q8N228 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.17■□□□□ 0.34
SCML4Q8N228 HLA-H-201ENST00000383620 1096 ntBASIC17.17■□□□□ 0.34
SCML4Q8N228 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.17■□□□□ 0.34
SCML4Q8N228 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.17■□□□□ 0.34
SCML4Q8N228 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.17■□□□□ 0.34
SCML4Q8N228 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SCML4Q8N228 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms