Protein–RNA interactions for Protein: Q8N1F7

NUP93, Nuclear pore complex protein Nup93, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93Q8N1F7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 KRT8P23-201ENST00000560090 1207 ntBASIC17.49■□□□□ 0.39
NUP93Q8N1F7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP93Q8N1F7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 AC009093.7-201ENST00000623853 1223 ntBASIC17.48■□□□□ 0.39
NUP93Q8N1F7 AC008267.7-201ENST00000624570 1194 ntBASIC17.48■□□□□ 0.39
NUP93Q8N1F7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP93Q8N1F7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 FER1L4-210ENST00000615531 5998 ntBASIC17.47■□□□□ 0.39
NUP93Q8N1F7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 AC004449.1-201ENST00000564240 433 ntBASIC17.47■□□□□ 0.39
NUP93Q8N1F7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 AC027307.2-201ENST00000591252 911 ntBASIC17.47■□□□□ 0.39
NUP93Q8N1F7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUP93Q8N1F7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms