Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 AC090142.2-201ENST00000483263 416 ntBASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 AC034105.1-201ENST00000563488 319 ntBASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 GGT4P-201ENST00000623672 1708 ntBASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC116Q8IYX3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 ME2P1-201ENST00000426028 1970 ntBASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 GGT3P-204ENST00000453783 1664 ntBASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 HMGA1P7-201ENST00000406908 502 ntBASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 AC096734.2-201ENST00000562054 433 ntBASIC15.67■□□□□ 0.1
CCDC116Q8IYX3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms