Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SHFQ7M4L6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHFQ7M4L6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHFQ7M4L6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.08■□□□□ 0.01
SHFQ7M4L6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SHFQ7M4L6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHFQ7M4L6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHFQ7M4L6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHFQ7M4L6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
SHFQ7M4L6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.08■□□□□ 0.01
SHFQ7M4L6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.08■□□□□ 0
SHFQ7M4L6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.08■□□□□ 0
SHFQ7M4L6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SHFQ7M4L6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.08■□□□□ 0
SHFQ7M4L6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
SHFQ7M4L6 ABCD1P5-201ENST00000445663 754 ntBASIC15.08■□□□□ 0
SHFQ7M4L6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.08■□□□□ 0
SHFQ7M4L6 AC012615.1-201ENST00000565797 1299 ntBASIC15.08■□□□□ 0
SHFQ7M4L6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.08■□□□□ 0
SHFQ7M4L6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.08■□□□□ 0
SHFQ7M4L6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
SHFQ7M4L6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 AP000550.4-202ENST00000639755 178 ntBASIC15.08■□□□□ 0
SHFQ7M4L6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SHFQ7M4L6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SHFQ7M4L6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 NORAD-201ENST00000565493 5339 ntBASIC15.08■□□□□ 0
SHFQ7M4L6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.08■□□□□ 0
SHFQ7M4L6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.08■□□□□ 0
SHFQ7M4L6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SHFQ7M4L6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 AL671710.1-201ENST00000610245 2349 ntBASIC15.08■□□□□ 0
SHFQ7M4L6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHFQ7M4L6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
SHFQ7M4L6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHFQ7M4L6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.07■□□□□ 0
SHFQ7M4L6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.07■□□□□ 0
SHFQ7M4L6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.07■□□□□ 0
SHFQ7M4L6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHFQ7M4L6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.07■□□□□ 0
SHFQ7M4L6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHFQ7M4L6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SHFQ7M4L6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHFQ7M4L6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SHFQ7M4L6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SHFQ7M4L6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHFQ7M4L6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHFQ7M4L6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SHFQ7M4L6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.07■□□□□ 0
SHFQ7M4L6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
SHFQ7M4L6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHFQ7M4L6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHFQ7M4L6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
SHFQ7M4L6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.07■□□□□ 0
SHFQ7M4L6 AP000867.3-201ENST00000524675 377 ntBASIC15.07■□□□□ 0
SHFQ7M4L6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
SHFQ7M4L6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SHFQ7M4L6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SHFQ7M4L6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.07■□□□□ 0
SHFQ7M4L6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SHFQ7M4L6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms