Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAPH1Q70E73 ARMC10P1-201ENST00000313754 855 ntBASIC16.77■□□□□ 0.28
RAPH1Q70E73 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.77■□□□□ 0.28
RAPH1Q70E73 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.77■□□□□ 0.28
RAPH1Q70E73 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.77■□□□□ 0.28
RAPH1Q70E73 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.77■□□□□ 0.28
RAPH1Q70E73 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.77■□□□□ 0.28
RAPH1Q70E73 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.77■□□□□ 0.28
RAPH1Q70E73 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.77■□□□□ 0.28
RAPH1Q70E73 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.77■□□□□ 0.28
RAPH1Q70E73 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.77■□□□□ 0.28
RAPH1Q70E73 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAPH1Q70E73 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAPH1Q70E73 AC005052.1-201ENST00000625181 2492 ntBASIC16.77■□□□□ 0.27
RAPH1Q70E73 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAPH1Q70E73 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.77■□□□□ 0.27
RAPH1Q70E73 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAPH1Q70E73 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
RAPH1Q70E73 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.77■□□□□ 0.27
RAPH1Q70E73 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.76■□□□□ 0.27
RAPH1Q70E73 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.76■□□□□ 0.27
RAPH1Q70E73 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.76■□□□□ 0.27
RAPH1Q70E73 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RAPH1Q70E73 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RAPH1Q70E73 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RAPH1Q70E73 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RAPH1Q70E73 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.76■□□□□ 0.27
RAPH1Q70E73 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RAPH1Q70E73 NKAPP1-205ENST00000585790 367 ntBASIC16.76■□□□□ 0.27
RAPH1Q70E73 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.76■□□□□ 0.27
RAPH1Q70E73 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.76■□□□□ 0.27
RAPH1Q70E73 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.76■□□□□ 0.27
RAPH1Q70E73 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAPH1Q70E73 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.76■□□□□ 0.27
RAPH1Q70E73 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.76■□□□□ 0.27
RAPH1Q70E73 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
RAPH1Q70E73 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.75■□□□□ 0.27
RAPH1Q70E73 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.75■□□□□ 0.27
RAPH1Q70E73 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.75■□□□□ 0.27
RAPH1Q70E73 AC106795.1-205ENST00000512851 1056 ntBASIC16.75■□□□□ 0.27
RAPH1Q70E73 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.75■□□□□ 0.27
RAPH1Q70E73 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.75■□□□□ 0.27
RAPH1Q70E73 AL732292.2-201ENST00000609649 430 ntBASIC16.75■□□□□ 0.27
RAPH1Q70E73 AL139288.1-201ENST00000623748 933 ntBASIC16.75■□□□□ 0.27
RAPH1Q70E73 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.75■□□□□ 0.27
RAPH1Q70E73 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
RAPH1Q70E73 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.75■□□□□ 0.27
RAPH1Q70E73 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.75■□□□□ 0.27
RAPH1Q70E73 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.75■□□□□ 0.27
RAPH1Q70E73 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RAPH1Q70E73 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RAPH1Q70E73 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.75■□□□□ 0.27
RAPH1Q70E73 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAPH1Q70E73 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.75■□□□□ 0.27
RAPH1Q70E73 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.74■□□□□ 0.27
RAPH1Q70E73 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms