Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.21■□□□□ 0.18
SGO1Q5FBB7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SGO1Q5FBB7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SGO1Q5FBB7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 HLA-J-202ENST00000469281 1241 ntBASIC16.2■□□□□ 0.18
SGO1Q5FBB7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 RPS15P9-201ENST00000494093 319 ntBASIC16.2■□□□□ 0.18
SGO1Q5FBB7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 AC013467.2-201ENST00000605472 835 ntBASIC16.2■□□□□ 0.18
SGO1Q5FBB7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 AL805961.1-202ENST00000641562 540 ntBASIC16.2■□□□□ 0.18
SGO1Q5FBB7 AF228730.7-201ENST00000641842 219 ntBASIC16.2■□□□□ 0.18
SGO1Q5FBB7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SGO1Q5FBB7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 PMS2P1-201ENST00000431037 1228 ntBASIC16.19■□□□□ 0.18
SGO1Q5FBB7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 FAM197Y8-203ENST00000450145 560 ntBASIC16.19■□□□□ 0.18
SGO1Q5FBB7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.19■□□□□ 0.18
SGO1Q5FBB7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 REXO1L3P-201ENST00000622202 1288 ntBASIC16.19■□□□□ 0.18
SGO1Q5FBB7 TP73-AS1-207ENST00000624167 988 ntBASIC16.19■□□□□ 0.18
SGO1Q5FBB7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.19■□□□□ 0.18
SGO1Q5FBB7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 PCDHA1-201ENST00000378133 2726 ntBASIC16.18■□□□□ 0.18
SGO1Q5FBB7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.18■□□□□ 0.18
SGO1Q5FBB7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms