Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO4Q2I0M5 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO4Q2I0M5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO4Q2I0M5 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO4Q2I0M5 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO4Q2I0M5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO4Q2I0M5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO4Q2I0M5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.97■□□□□ 0.15
RSPO4Q2I0M5 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.97■□□□□ 0.15
RSPO4Q2I0M5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RSPO4Q2I0M5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RSPO4Q2I0M5 AC131009.4-201ENST00000624048 1740 ntBASIC15.97■□□□□ 0.15
RSPO4Q2I0M5 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 YBX1P6-201ENST00000442962 1002 ntBASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 RPL13AP20-201ENST00000459725 609 ntBASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 AP001258.2-201ENST00000529891 490 ntBASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.96■□□□□ 0.15
RSPO4Q2I0M5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RSPO4Q2I0M5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RSPO4Q2I0M5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RSPO4Q2I0M5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RSPO4Q2I0M5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 NOC2LP1-202ENST00000452600 2235 ntBASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 BCRP2-202ENST00000447763 634 ntBASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 BCRP6-201ENST00000510112 632 ntBASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 BCRP7-201ENST00000511549 544 ntBASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 AC009542.2-202ENST00000619004 1067 ntBASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 ABALON-201ENST00000629058 1903 ntBASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.95■□□□□ 0.14
RSPO4Q2I0M5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms