Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
COL16A1Q07092 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC21.91■■□□□ 1.1
COL16A1Q07092 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC21.91■■□□□ 1.1
COL16A1Q07092 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
COL16A1Q07092 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC21.91■■□□□ 1.1
COL16A1Q07092 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC21.91■■□□□ 1.1
COL16A1Q07092 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL16A1Q07092 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
COL16A1Q07092 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
COL16A1Q07092 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL16A1Q07092 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL16A1Q07092 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
COL16A1Q07092 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL16A1Q07092 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.91■■□□□ 1.1
COL16A1Q07092 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC21.91■■□□□ 1.1
COL16A1Q07092 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL16A1Q07092 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL16A1Q07092 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL16A1Q07092 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL16A1Q07092 AZGP1P1-201ENST00000411909 902 ntBASIC21.91■■□□□ 1.1
COL16A1Q07092 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC21.91■■□□□ 1.1
COL16A1Q07092 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC21.91■■□□□ 1.1
COL16A1Q07092 RPSAP36-202ENST00000494591 1261 ntBASIC21.91■■□□□ 1.1
COL16A1Q07092 AC022137.2-201ENST00000503482 481 ntBASIC21.91■■□□□ 1.1
COL16A1Q07092 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC21.91■■□□□ 1.1
COL16A1Q07092 AHRR-211ENST00000515206 462 ntTSL 5 BASIC21.91■■□□□ 1.1
COL16A1Q07092 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC21.91■■□□□ 1.1
COL16A1Q07092 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC21.91■■□□□ 1.1
COL16A1Q07092 MIR4741-201ENST00000579822 90 ntBASIC21.91■■□□□ 1.1
COL16A1Q07092 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL16A1Q07092 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC21.91■■□□□ 1.1
COL16A1Q07092 MIR7845-201ENST00000618396 99 ntBASIC21.91■■□□□ 1.1
COL16A1Q07092 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC21.91■■□□□ 1.1
COL16A1Q07092 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
COL16A1Q07092 AC090164.3-201ENST00000610780 2143 ntBASIC21.9■■□□□ 1.1
COL16A1Q07092 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
COL16A1Q07092 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
COL16A1Q07092 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL16A1Q07092 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL16A1Q07092 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL16A1Q07092 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.9■■□□□ 1.1
COL16A1Q07092 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC21.9■■□□□ 1.1
COL16A1Q07092 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL16A1Q07092 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.9■■□□□ 1.1
COL16A1Q07092 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
COL16A1Q07092 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC21.9■■□□□ 1.1
COL16A1Q07092 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL16A1Q07092 FNTAP2-201ENST00000430308 634 ntBASIC21.9■■□□□ 1.1
COL16A1Q07092 AC093433.1-201ENST00000458048 571 ntBASIC21.9■■□□□ 1.1
COL16A1Q07092 APOA2-204ENST00000464492 530 ntTSL 3 BASIC21.9■■□□□ 1.1
COL16A1Q07092 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL16A1Q07092 AC025279.2-201ENST00000569730 653 ntBASIC21.9■■□□□ 1.1
COL16A1Q07092 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL16A1Q07092 AL096828.3-201ENST00000615354 462 ntBASIC21.9■■□□□ 1.1
COL16A1Q07092 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
COL16A1Q07092 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
COL16A1Q07092 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
COL16A1Q07092 AC012317.2-201ENST00000623305 2251 ntBASIC21.89■■□□□ 1.1
COL16A1Q07092 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
COL16A1Q07092 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL16A1Q07092 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC21.89■■□□□ 1.1
COL16A1Q07092 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL16A1Q07092 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL16A1Q07092 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC21.89■■□□□ 1.09
COL16A1Q07092 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC21.89■■□□□ 1.09
COL16A1Q07092 NDUFV2P1-201ENST00000596415 907 ntBASIC21.89■■□□□ 1.09
COL16A1Q07092 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL16A1Q07092 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL16A1Q07092 TUBB8P12-201ENST00000308911 1335 ntBASIC21.89■■□□□ 1.09
COL16A1Q07092 TUBB7P-202ENST00000428444 1305 ntBASIC21.89■■□□□ 1.09
COL16A1Q07092 TUBB8P7-204ENST00000567960 1332 ntBASIC21.89■■□□□ 1.09
COL16A1Q07092 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC21.89■■□□□ 1.09
COL16A1Q07092 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL16A1Q07092 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.89■■□□□ 1.09
COL16A1Q07092 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
COL16A1Q07092 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL16A1Q07092 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL16A1Q07092 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL16A1Q07092 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL16A1Q07092 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC21.88■■□□□ 1.09
COL16A1Q07092 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC21.88■■□□□ 1.09
COL16A1Q07092 ACR-203ENST00000529621 708 ntTSL 5 BASIC21.88■■□□□ 1.09
COL16A1Q07092 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC21.88■■□□□ 1.09
COL16A1Q07092 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
COL16A1Q07092 AHCYP2-201ENST00000430630 1300 ntBASIC21.88■■□□□ 1.09
COL16A1Q07092 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
COL16A1Q07092 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.88■■□□□ 1.09
COL16A1Q07092 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL16A1Q07092 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL16A1Q07092 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.88■■□□□ 1.09
COL16A1Q07092 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL16A1Q07092 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL16A1Q07092 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
COL16A1Q07092 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
COL16A1Q07092 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL16A1Q07092 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL16A1Q07092 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL16A1Q07092 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
COL16A1Q07092 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL16A1Q07092 VDAC1P7-201ENST00000462417 847 ntBASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms