Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAE1P78406 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.74■□□□□ 0.11
RAE1P78406 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.74■□□□□ 0.11
RAE1P78406 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.74■□□□□ 0.11
RAE1P78406 AC079776.4-201ENST00000511039 504 ntBASIC15.74■□□□□ 0.11
RAE1P78406 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.74■□□□□ 0.11
RAE1P78406 AC034105.1-201ENST00000563488 319 ntBASIC15.74■□□□□ 0.11
RAE1P78406 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.74■□□□□ 0.11
RAE1P78406 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RAE1P78406 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.74■□□□□ 0.11
RAE1P78406 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAE1P78406 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAE1P78406 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAE1P78406 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.74■□□□□ 0.11
RAE1P78406 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RAE1P78406 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAE1P78406 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RAE1P78406 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.74■□□□□ 0.11
RAE1P78406 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAE1P78406 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAE1P78406 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.74■□□□□ 0.11
RAE1P78406 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.73■□□□□ 0.11
RAE1P78406 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RAE1P78406 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RAE1P78406 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.73■□□□□ 0.11
RAE1P78406 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
RAE1P78406 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.73■□□□□ 0.11
RAE1P78406 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.73■□□□□ 0.11
RAE1P78406 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.73■□□□□ 0.11
RAE1P78406 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RAE1P78406 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 PMS2P4-201ENST00000412466 1052 ntBASIC15.73■□□□□ 0.11
RAE1P78406 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.73■□□□□ 0.11
RAE1P78406 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.73■□□□□ 0.11
RAE1P78406 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.73■□□□□ 0.11
RAE1P78406 AC145285.3-201ENST00000564603 959 ntBASIC15.73■□□□□ 0.11
RAE1P78406 AC021097.1-201ENST00000607902 574 ntBASIC15.73■□□□□ 0.11
RAE1P78406 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.73■□□□□ 0.11
RAE1P78406 AC005622.1-201ENST00000636801 1703 ntBASIC15.73■□□□□ 0.11
RAE1P78406 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RAE1P78406 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.73■□□□□ 0.11
RAE1P78406 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAE1P78406 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RAE1P78406 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.73■□□□□ 0.11
RAE1P78406 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RAE1P78406 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.72■□□□□ 0.11
RAE1P78406 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RAE1P78406 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RAE1P78406 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
RAE1P78406 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 CICP6-201ENST00000457191 2729 ntBASIC15.72■□□□□ 0.11
RAE1P78406 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 AC104109.2-201ENST00000602919 1418 ntBASIC15.72■□□□□ 0.11
RAE1P78406 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.72■□□□□ 0.11
RAE1P78406 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RAE1P78406 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RAE1P78406 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
RAE1P78406 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.72■□□□□ 0.11
RAE1P78406 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.72■□□□□ 0.11
RAE1P78406 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.72■□□□□ 0.11
RAE1P78406 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.72■□□□□ 0.11
RAE1P78406 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.72■□□□□ 0.11
RAE1P78406 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.72■□□□□ 0.11
RAE1P78406 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAE1P78406 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
RAE1P78406 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms