Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.26■□□□□ 0.03
CDC42P60953 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42P60953 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDC42P60953 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42P60953 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CDC42P60953 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42P60953 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CDC42P60953 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CDC42P60953 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42P60953 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
CDC42P60953 AL020989.1-201ENST00000422979 469 ntBASIC15.25■□□□□ 0.03
CDC42P60953 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.25■□□□□ 0.03
CDC42P60953 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42P60953 AC092647.4-201ENST00000457211 535 ntBASIC15.25■□□□□ 0.03
CDC42P60953 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42P60953 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42P60953 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDC42P60953 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.25■□□□□ 0.03
CDC42P60953 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDC42P60953 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.25■□□□□ 0.03
CDC42P60953 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42P60953 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CDC42P60953 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42P60953 AC144831.1-201ENST00000573312 2656 ntBASIC15.25■□□□□ 0.03
CDC42P60953 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.25■□□□□ 0.03
CDC42P60953 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42P60953 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.25■□□□□ 0.03
CDC42P60953 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDC42P60953 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42P60953 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDC42P60953 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.24■□□□□ 0.03
CDC42P60953 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CDC42P60953 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.24■□□□□ 0.03
CDC42P60953 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 AP005117.1-202ENST00000581724 1908 ntBASIC15.24■□□□□ 0.03
CDC42P60953 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 AC113347.1-201ENST00000413321 391 ntBASIC15.24■□□□□ 0.03
CDC42P60953 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.24■□□□□ 0.03
CDC42P60953 AL645929.1-201ENST00000420084 975 ntBASIC15.24■□□□□ 0.03
CDC42P60953 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.24■□□□□ 0.03
CDC42P60953 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.24■□□□□ 0.03
CDC42P60953 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.24■□□□□ 0.03
CDC42P60953 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.24■□□□□ 0.03
CDC42P60953 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.24■□□□□ 0.03
CDC42P60953 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.24■□□□□ 0.03
CDC42P60953 AC005363.2-201ENST00000618631 242 ntBASIC15.24■□□□□ 0.03
CDC42P60953 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.24■□□□□ 0.03
CDC42P60953 AC097493.4-201ENST00000641197 219 ntBASIC15.24■□□□□ 0.03
CDC42P60953 AL161772.1-201ENST00000610494 4412 ntBASIC15.24■□□□□ 0.03
CDC42P60953 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDC42P60953 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.24■□□□□ 0.03
CDC42P60953 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CDC42P60953 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDC42P60953 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CDC42P60953 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 AC097637.2-201ENST00000624096 1997 ntBASIC15.24■□□□□ 0.03
CDC42P60953 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.24■□□□□ 0.03
CDC42P60953 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CDC42P60953 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC42P60953 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms