Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN6P56747 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.9■□□□□ 0.14
CLDN6P56747 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLDN6P56747 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CLDN6P56747 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
CLDN6P56747 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLDN6P56747 AC093525.9-201ENST00000624961 1746 ntBASIC15.9■□□□□ 0.14
CLDN6P56747 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN6P56747 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CLDN6P56747 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN6P56747 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CLDN6P56747 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN6P56747 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN6P56747 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLDN6P56747 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN6P56747 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CLDN6P56747 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
CLDN6P56747 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CLDN6P56747 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN6P56747 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLDN6P56747 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN6P56747 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN6P56747 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN6P56747 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN6P56747 HLA-H-201ENST00000383620 1096 ntBASIC15.89■□□□□ 0.13
CLDN6P56747 AC079776.1-201ENST00000401540 1152 ntBASIC15.89■□□□□ 0.13
CLDN6P56747 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN6P56747 AC112492.5-201ENST00000421897 457 ntBASIC15.89■□□□□ 0.13
CLDN6P56747 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN6P56747 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.89■□□□□ 0.13
CLDN6P56747 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN6P56747 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN6P56747 RN7SL752P-201ENST00000463779 287 ntBASIC15.89■□□□□ 0.13
CLDN6P56747 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.89■□□□□ 0.13
CLDN6P56747 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN6P56747 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN6P56747 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CLDN6P56747 AC021097.1-201ENST00000607902 574 ntBASIC15.89■□□□□ 0.13
CLDN6P56747 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN6P56747 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN6P56747 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN6P56747 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN6P56747 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN6P56747 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN6P56747 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN6P56747 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN6P56747 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN6P56747 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLDN6P56747 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN6P56747 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN6P56747 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
CLDN6P56747 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN6P56747 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN6P56747 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CLDN6P56747 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CLDN6P56747 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN6P56747 AL671710.1-201ENST00000610245 2349 ntBASIC15.88■□□□□ 0.13
CLDN6P56747 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CLDN6P56747 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CLDN6P56747 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN6P56747 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN6P56747 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN6P56747 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 AL353705.2-201ENST00000428243 662 ntBASIC15.88■□□□□ 0.13
CLDN6P56747 AL353779.1-201ENST00000434793 351 ntBASIC15.88■□□□□ 0.13
CLDN6P56747 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN6P56747 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.88■□□□□ 0.13
CLDN6P56747 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.88■□□□□ 0.13
CLDN6P56747 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.88■□□□□ 0.13
CLDN6P56747 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN6P56747 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN6P56747 MIR4492-201ENST00000581627 80 ntBASIC15.88■□□□□ 0.13
CLDN6P56747 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.88■□□□□ 0.13
CLDN6P56747 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN6P56747 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN6P56747 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN6P56747 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN6P56747 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN6P56747 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms