Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN5P54829 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN5P54829 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN5P54829 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PTPN5P54829 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN5P54829 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN5P54829 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN5P54829 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN5P54829 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN5P54829 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN5P54829 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN5P54829 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN5P54829 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN5P54829 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
PTPN5P54829 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN5P54829 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN5P54829 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN5P54829 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.13■□□□□ 0.33
PTPN5P54829 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PTPN5P54829 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PTPN5P54829 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN5P54829 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PTPN5P54829 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PTPN5P54829 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN5P54829 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.13■□□□□ 0.33
PTPN5P54829 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN5P54829 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.13■□□□□ 0.33
PTPN5P54829 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.13■□□□□ 0.33
PTPN5P54829 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.13■□□□□ 0.33
PTPN5P54829 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.13■□□□□ 0.33
PTPN5P54829 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN5P54829 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN5P54829 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PTPN5P54829 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PTPN5P54829 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN5P54829 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN5P54829 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PTPN5P54829 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN5P54829 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN5P54829 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN5P54829 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PTPN5P54829 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
PTPN5P54829 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN5P54829 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN5P54829 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN5P54829 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN5P54829 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
PTPN5P54829 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN5P54829 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN5P54829 AC087499.6-201ENST00000411576 835 ntBASIC17.12■□□□□ 0.33
PTPN5P54829 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN5P54829 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.12■□□□□ 0.33
PTPN5P54829 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PTPN5P54829 AC133552.6-201ENST00000613406 534 ntBASIC17.12■□□□□ 0.33
PTPN5P54829 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN5P54829 TMEM14EP-202ENST00000639378 1296 ntBASIC17.12■□□□□ 0.33
PTPN5P54829 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN5P54829 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN5P54829 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN5P54829 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN5P54829 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PTPN5P54829 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PTPN5P54829 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN5P54829 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN5P54829 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN5P54829 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN5P54829 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
PTPN5P54829 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN5P54829 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN5P54829 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN5P54829 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN5P54829 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN5P54829 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.11■□□□□ 0.33
PTPN5P54829 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN5P54829 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
PTPN5P54829 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN5P54829 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN5P54829 MIR4538-201ENST00000581377 78 ntBASIC17.11■□□□□ 0.33
PTPN5P54829 SPDYE12P-201ENST00000618416 771 ntBASIC17.11■□□□□ 0.33
PTPN5P54829 COX11-210ENST00000639671 696 ntBASIC17.11■□□□□ 0.33
PTPN5P54829 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms