Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 AC092384.3-202ENST00000564646 2873 ntBASIC17.09■□□□□ 0.33
ITGA8P53708 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 AC087163.2-201ENST00000457299 853 ntBASIC17.09■□□□□ 0.33
ITGA8P53708 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ITGA8P53708 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.09■□□□□ 0.33
ITGA8P53708 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ITGA8P53708 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.09■□□□□ 0.33
ITGA8P53708 AC138894.3-201ENST00000603787 634 ntBASIC17.09■□□□□ 0.33
ITGA8P53708 REXO1L3P-201ENST00000622202 1288 ntBASIC17.09■□□□□ 0.33
ITGA8P53708 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.09■□□□□ 0.33
ITGA8P53708 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.09■□□□□ 0.33
ITGA8P53708 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
ITGA8P53708 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.09■□□□□ 0.33
ITGA8P53708 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.09■□□□□ 0.33
ITGA8P53708 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
ITGA8P53708 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.09■□□□□ 0.33
ITGA8P53708 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.09■□□□□ 0.33
ITGA8P53708 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ITGA8P53708 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
ITGA8P53708 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.09■□□□□ 0.33
ITGA8P53708 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGA8P53708 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
ITGA8P53708 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.08■□□□□ 0.33
ITGA8P53708 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ITGA8P53708 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITGA8P53708 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ITGA8P53708 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ITGA8P53708 PCGF3-213ENST00000620529 1899 ntBASIC17.08■□□□□ 0.33
ITGA8P53708 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITGA8P53708 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
ITGA8P53708 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.08■□□□□ 0.32
ITGA8P53708 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.08■□□□□ 0.32
ITGA8P53708 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITGA8P53708 KRT16P4-201ENST00000453883 522 ntBASIC17.08■□□□□ 0.32
ITGA8P53708 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.08■□□□□ 0.32
ITGA8P53708 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITGA8P53708 AC106795.1-205ENST00000512851 1056 ntBASIC17.08■□□□□ 0.32
ITGA8P53708 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.08■□□□□ 0.32
ITGA8P53708 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.08■□□□□ 0.32
ITGA8P53708 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ITGA8P53708 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.08■□□□□ 0.32
ITGA8P53708 AC092119.3-201ENST00000612618 583 ntBASIC17.08■□□□□ 0.32
ITGA8P53708 AC093458.2-201ENST00000623150 629 ntBASIC17.08■□□□□ 0.32
ITGA8P53708 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.08■□□□□ 0.32
ITGA8P53708 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.08■□□□□ 0.32
ITGA8P53708 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITGA8P53708 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITGA8P53708 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ITGA8P53708 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITGA8P53708 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITGA8P53708 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
ITGA8P53708 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITGA8P53708 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ITGA8P53708 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITGA8P53708 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITGA8P53708 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ITGA8P53708 GPAA1P2-202ENST00000606848 1787 ntBASIC17.07■□□□□ 0.32
ITGA8P53708 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITGA8P53708 AC131009.4-201ENST00000624048 1740 ntBASIC17.07■□□□□ 0.32
ITGA8P53708 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITGA8P53708 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ITGA8P53708 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.07■□□□□ 0.32
ITGA8P53708 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ITGA8P53708 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ITGA8P53708 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITGA8P53708 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.07■□□□□ 0.32
ITGA8P53708 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.07■□□□□ 0.32
ITGA8P53708 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITGA8P53708 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
ITGA8P53708 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ITGA8P53708 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.07■□□□□ 0.32
ITGA8P53708 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITGA8P53708 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.07■□□□□ 0.32
ITGA8P53708 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.07■□□□□ 0.32
ITGA8P53708 AL589182.2-201ENST00000619332 1049 ntBASIC17.07■□□□□ 0.32
ITGA8P53708 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITGA8P53708 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.07■□□□□ 0.32
ITGA8P53708 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.07■□□□□ 0.32
ITGA8P53708 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
ITGA8P53708 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.07■□□□□ 0.32
ITGA8P53708 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ITGA8P53708 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms