Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.67□□□□□ -0.22
NKX2-1P43699 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX2-1P43699 AC132938.5-201ENST00000624980 1813 ntBASIC13.67□□□□□ -0.22
NKX2-1P43699 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX2-1P43699 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX2-1P43699 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NKX2-1P43699 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.67□□□□□ -0.22
NKX2-1P43699 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
NKX2-1P43699 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
NKX2-1P43699 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NKX2-1P43699 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.67□□□□□ -0.22
NKX2-1P43699 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
NKX2-1P43699 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX2-1P43699 AC005363.2-201ENST00000618631 242 ntBASIC13.67□□□□□ -0.22
NKX2-1P43699 AC097493.4-201ENST00000641197 219 ntBASIC13.67□□□□□ -0.22
NKX2-1P43699 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
NKX2-1P43699 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.67□□□□□ -0.22
NKX2-1P43699 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX2-1P43699 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX2-1P43699 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX2-1P43699 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX2-1P43699 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX2-1P43699 OR2I1P-209ENST00000641730 5365 ntBASIC13.67□□□□□ -0.22
NKX2-1P43699 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-1P43699 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
NKX2-1P43699 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX2-1P43699 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX2-1P43699 AP005117.1-202ENST00000581724 1908 ntBASIC13.66□□□□□ -0.22
NKX2-1P43699 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX2-1P43699 AC073347.1-201ENST00000421633 2643 ntBASIC13.66□□□□□ -0.22
NKX2-1P43699 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NKX2-1P43699 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX2-1P43699 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX2-1P43699 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX2-1P43699 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NKX2-1P43699 AC006277.1-201ENST00000624348 1610 ntBASIC13.66□□□□□ -0.22
NKX2-1P43699 AC099063.4-201ENST00000641099 1602 ntBASIC13.66□□□□□ -0.22
NKX2-1P43699 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
NKX2-1P43699 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NKX2-1P43699 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NKX2-1P43699 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX2-1P43699 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
NKX2-1P43699 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX2-1P43699 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.66□□□□□ -0.22
NKX2-1P43699 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX2-1P43699 AC013467.2-201ENST00000605472 835 ntBASIC13.66□□□□□ -0.22
NKX2-1P43699 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX2-1P43699 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX2-1P43699 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX2-1P43699 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX2-1P43699 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NKX2-1P43699 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX2-1P43699 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX2-1P43699 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NKX2-1P43699 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NKX2-1P43699 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX2-1P43699 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-1P43699 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
NKX2-1P43699 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-1P43699 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms