Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.92■□□□□ 0.46
TNFSF9P41273 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.92■□□□□ 0.46
TNFSF9P41273 AC142381.1-201ENST00000426099 345 ntBASIC17.92■□□□□ 0.46
TNFSF9P41273 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
TNFSF9P41273 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
TNFSF9P41273 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFSF9P41273 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TNFSF9P41273 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.92■□□□□ 0.46
TNFSF9P41273 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.92■□□□□ 0.46
TNFSF9P41273 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFSF9P41273 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TNFSF9P41273 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFSF9P41273 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TNFSF9P41273 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TNFSF9P41273 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
TNFSF9P41273 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.92■□□□□ 0.46
TNFSF9P41273 KRT8P23-201ENST00000560090 1207 ntBASIC17.92■□□□□ 0.46
TNFSF9P41273 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.92■□□□□ 0.46
TNFSF9P41273 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFSF9P41273 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.92■□□□□ 0.46
TNFSF9P41273 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.92■□□□□ 0.46
TNFSF9P41273 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.92■□□□□ 0.46
TNFSF9P41273 AC084121.4-201ENST00000641598 221 ntBASIC17.92■□□□□ 0.46
TNFSF9P41273 AF228730.8-201ENST00000642140 221 ntBASIC17.92■□□□□ 0.46
TNFSF9P41273 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFSF9P41273 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TNFSF9P41273 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFSF9P41273 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFSF9P41273 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFSF9P41273 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFSF9P41273 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.92■□□□□ 0.46
TNFSF9P41273 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFSF9P41273 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
TNFSF9P41273 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.91■□□□□ 0.46
TNFSF9P41273 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFSF9P41273 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNFSF9P41273 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFSF9P41273 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFSF9P41273 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFSF9P41273 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFSF9P41273 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFSF9P41273 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFSF9P41273 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFSF9P41273 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TNFSF9P41273 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFSF9P41273 PCDHA14-201ENST00000506751 2298 ntBASIC17.91■□□□□ 0.46
TNFSF9P41273 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFSF9P41273 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TNFSF9P41273 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFSF9P41273 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFSF9P41273 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFSF9P41273 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.91■□□□□ 0.46
TNFSF9P41273 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFSF9P41273 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.91■□□□□ 0.46
TNFSF9P41273 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.91■□□□□ 0.46
TNFSF9P41273 AC073389.1-201ENST00000595595 795 ntBASIC17.91■□□□□ 0.46
TNFSF9P41273 AC020765.3-201ENST00000613051 740 ntBASIC17.91■□□□□ 0.46
TNFSF9P41273 AC093028.1-201ENST00000622998 982 ntBASIC17.91■□□□□ 0.46
TNFSF9P41273 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFSF9P41273 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNFSF9P41273 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TNFSF9P41273 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFSF9P41273 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TNFSF9P41273 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.91■□□□□ 0.46
TNFSF9P41273 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFSF9P41273 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TNFSF9P41273 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFSF9P41273 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.91■□□□□ 0.46
TNFSF9P41273 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFSF9P41273 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFSF9P41273 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TNFSF9P41273 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFSF9P41273 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNFSF9P41273 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TNFSF9P41273 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFSF9P41273 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFSF9P41273 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFSF9P41273 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFSF9P41273 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFSF9P41273 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.9■□□□□ 0.46
TNFSF9P41273 PMS2P2-201ENST00000425039 1128 ntBASIC17.9■□□□□ 0.46
TNFSF9P41273 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TNFSF9P41273 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.9■□□□□ 0.46
TNFSF9P41273 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.9■□□□□ 0.46
TNFSF9P41273 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.9■□□□□ 0.46
TNFSF9P41273 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.9■□□□□ 0.46
TNFSF9P41273 HLA-J-203ENST00000494367 1087 ntBASIC17.9■□□□□ 0.46
TNFSF9P41273 AC105233.2-201ENST00000523697 349 ntBASIC17.9■□□□□ 0.46
TNFSF9P41273 AF228730.5-201ENST00000530288 346 ntBASIC17.9■□□□□ 0.46
TNFSF9P41273 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.9■□□□□ 0.46
TNFSF9P41273 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.9■□□□□ 0.46
TNFSF9P41273 LINC00628-201ENST00000628516 1289 ntBASIC17.9■□□□□ 0.46
TNFSF9P41273 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.9■□□□□ 0.46
TNFSF9P41273 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNFSF9P41273 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNFSF9P41273 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFSF9P41273 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNFSF9P41273 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFSF9P41273 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFSF9P41273 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms