Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC063952.2-201ENST00000498792 1227 ntBASIC13.75□□□□□ -0.21
SNCAP37840 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.75□□□□□ -0.21
SNCAP37840 STK19B-204ENST00000512515 211 ntBASIC13.75□□□□□ -0.21
SNCAP37840 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SNCAP37840 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.75□□□□□ -0.21
SNCAP37840 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.75□□□□□ -0.21
SNCAP37840 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SNCAP37840 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
SNCAP37840 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.75□□□□□ -0.21
SNCAP37840 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SNCAP37840 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.75□□□□□ -0.21
SNCAP37840 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.75□□□□□ -0.21
SNCAP37840 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.75□□□□□ -0.21
SNCAP37840 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCAP37840 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SNCAP37840 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.74□□□□□ -0.21
SNCAP37840 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
SNCAP37840 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
SNCAP37840 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SNCAP37840 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
SNCAP37840 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.74□□□□□ -0.21
SNCAP37840 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.74□□□□□ -0.21
SNCAP37840 RN7SL606P-201ENST00000472779 293 ntBASIC13.74□□□□□ -0.21
SNCAP37840 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.74□□□□□ -0.21
SNCAP37840 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.74□□□□□ -0.21
SNCAP37840 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
SNCAP37840 STK25P1-201ENST00000585406 838 ntBASIC13.74□□□□□ -0.21
SNCAP37840 AL138831.2-201ENST00000606564 490 ntBASIC13.74□□□□□ -0.21
SNCAP37840 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.74□□□□□ -0.21
SNCAP37840 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.74□□□□□ -0.21
SNCAP37840 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.74□□□□□ -0.21
SNCAP37840 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SNCAP37840 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.74□□□□□ -0.21
SNCAP37840 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SNCAP37840 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.74□□□□□ -0.21
SNCAP37840 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
SNCAP37840 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SNCAP37840 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 EGFEM1P-202ENST00000431685 1563 ntBASIC13.74□□□□□ -0.21
SNCAP37840 AC006538.1-201ENST00000567905 1585 ntBASIC13.74□□□□□ -0.21
SNCAP37840 AL049757.1-201ENST00000616842 1596 ntBASIC13.74□□□□□ -0.21
SNCAP37840 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SNCAP37840 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SNCAP37840 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCAP37840 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.74□□□□□ -0.21
SNCAP37840 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 KRT8P10-201ENST00000450021 1447 ntBASIC13.73□□□□□ -0.21
SNCAP37840 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.73□□□□□ -0.21
SNCAP37840 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.73□□□□□ -0.21
SNCAP37840 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SNCAP37840 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
SNCAP37840 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SNCAP37840 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.73□□□□□ -0.21
SNCAP37840 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SNCAP37840 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.73□□□□□ -0.21
SNCAP37840 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SNCAP37840 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SNCAP37840 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.73□□□□□ -0.21
SNCAP37840 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
SNCAP37840 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.73□□□□□ -0.21
SNCAP37840 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.73□□□□□ -0.21
SNCAP37840 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SNCAP37840 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.73□□□□□ -0.21
SNCAP37840 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.73□□□□□ -0.21
SNCAP37840 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SNCAP37840 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.73□□□□□ -0.21
SNCAP37840 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms