Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT9P35527 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT9P35527 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT9P35527 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT9P35527 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT9P35527 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
KRT9P35527 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT9P35527 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT9P35527 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT9P35527 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT9P35527 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT9P35527 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
KRT9P35527 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT9P35527 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT9P35527 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT9P35527 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT9P35527 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT9P35527 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
KRT9P35527 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.23■□□□□ 0.51
KRT9P35527 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
KRT9P35527 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
KRT9P35527 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT9P35527 AC011270.2-201ENST00000624293 2550 ntBASIC18.23■□□□□ 0.51
KRT9P35527 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT9P35527 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT9P35527 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT9P35527 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT9P35527 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.23■□□□□ 0.51
KRT9P35527 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT9P35527 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT9P35527 AL596257.1-201ENST00000641463 2694 ntBASIC18.22■□□□□ 0.51
KRT9P35527 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.22■□□□□ 0.51
KRT9P35527 NFIC-211ENST00000641145 8399 ntBASIC18.22■□□□□ 0.51
KRT9P35527 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT9P35527 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT9P35527 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.22■□□□□ 0.51
KRT9P35527 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 DUSP5P1-201ENST00000441325 1139 ntBASIC18.22■□□□□ 0.51
KRT9P35527 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.22■□□□□ 0.51
KRT9P35527 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
KRT9P35527 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.22■□□□□ 0.51
KRT9P35527 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
KRT9P35527 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
KRT9P35527 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.22■□□□□ 0.51
KRT9P35527 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT9P35527 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT9P35527 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
KRT9P35527 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT9P35527 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
KRT9P35527 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
KRT9P35527 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
KRT9P35527 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.21■□□□□ 0.51
KRT9P35527 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
KRT9P35527 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT9P35527 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
KRT9P35527 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
KRT9P35527 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
KRT9P35527 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT9P35527 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.21■□□□□ 0.51
KRT9P35527 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.21■□□□□ 0.51
KRT9P35527 AC021087.4-201ENST00000563761 564 ntBASIC18.21■□□□□ 0.51
KRT9P35527 AL139424.1-201ENST00000607572 797 ntBASIC18.21■□□□□ 0.51
KRT9P35527 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.21■□□□□ 0.51
KRT9P35527 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms