Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.43■□□□□ 0.06
LCN1P31025 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LCN1P31025 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.43■□□□□ 0.06
LCN1P31025 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LCN1P31025 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LCN1P31025 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LCN1P31025 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LCN1P31025 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LCN1P31025 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LCN1P31025 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
LCN1P31025 FLJ38576-201ENST00000623820 2459 ntBASIC15.42■□□□□ 0.06
LCN1P31025 AL603756.1-201ENST00000606511 2163 ntBASIC15.42■□□□□ 0.06
LCN1P31025 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LCN1P31025 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.42■□□□□ 0.06
LCN1P31025 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LCN1P31025 AC103702.1-201ENST00000548801 2630 ntBASIC15.42■□□□□ 0.06
LCN1P31025 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LCN1P31025 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.42■□□□□ 0.06
LCN1P31025 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.42■□□□□ 0.06
LCN1P31025 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LCN1P31025 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LCN1P31025 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LCN1P31025 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
LCN1P31025 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.42■□□□□ 0.06
LCN1P31025 IGLL3P-201ENST00000412472 434 ntBASIC15.42■□□□□ 0.06
LCN1P31025 AGGF1P2-201ENST00000426656 2106 ntBASIC15.42■□□□□ 0.06
LCN1P31025 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.42■□□□□ 0.06
LCN1P31025 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.42■□□□□ 0.06
LCN1P31025 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.42■□□□□ 0.06
LCN1P31025 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.42■□□□□ 0.06
LCN1P31025 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.42■□□□□ 0.06
LCN1P31025 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.42■□□□□ 0.06
LCN1P31025 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LCN1P31025 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
LCN1P31025 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LCN1P31025 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LCN1P31025 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
LCN1P31025 AC104109.2-201ENST00000602919 1418 ntBASIC15.42■□□□□ 0.06
LCN1P31025 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LCN1P31025 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LCN1P31025 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LCN1P31025 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LCN1P31025 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.42■□□□□ 0.06
LCN1P31025 HLA-A-202ENST00000376806 1854 ntBASIC15.42■□□□□ 0.06
LCN1P31025 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.42■□□□□ 0.06
LCN1P31025 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.42■□□□□ 0.06
LCN1P31025 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LCN1P31025 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LCN1P31025 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
LCN1P31025 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.41■□□□□ 0.06
LCN1P31025 SNX33P1-201ENST00000592116 1762 ntBASIC15.41■□□□□ 0.06
LCN1P31025 AC008741.2-201ENST00000612792 3115 ntBASIC15.41■□□□□ 0.06
LCN1P31025 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LCN1P31025 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.41■□□□□ 0.06
LCN1P31025 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.41■□□□□ 0.06
LCN1P31025 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LCN1P31025 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.41■□□□□ 0.06
LCN1P31025 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LCN1P31025 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.41■□□□□ 0.06
LCN1P31025 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LCN1P31025 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LCN1P31025 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 AL513480.1-201ENST00000451731 511 ntBASIC15.41■□□□□ 0.06
LCN1P31025 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.41■□□□□ 0.06
LCN1P31025 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.41■□□□□ 0.06
LCN1P31025 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.41■□□□□ 0.06
LCN1P31025 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.41■□□□□ 0.06
LCN1P31025 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.41■□□□□ 0.06
LCN1P31025 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.41■□□□□ 0.06
LCN1P31025 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.41■□□□□ 0.06
LCN1P31025 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.41■□□□□ 0.06
LCN1P31025 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
LCN1P31025 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.41■□□□□ 0.06
LCN1P31025 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LCN1P31025 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
LCN1P31025 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.41■□□□□ 0.06
LCN1P31025 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LCN1P31025 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P31025 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P31025 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P31025 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LCN1P31025 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms