Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
KRT4P19013 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.73■□□□□ 0.27
KRT4P19013 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.73■□□□□ 0.27
KRT4P19013 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.73■□□□□ 0.27
KRT4P19013 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT4P19013 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.73■□□□□ 0.27
KRT4P19013 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
KRT4P19013 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.73■□□□□ 0.27
KRT4P19013 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT4P19013 TOP3BP1-201ENST00000420768 1380 ntBASIC16.73■□□□□ 0.27
KRT4P19013 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT4P19013 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT4P19013 AC016734.2-201ENST00000624325 1377 ntBASIC16.73■□□□□ 0.27
KRT4P19013 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT4P19013 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT4P19013 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT4P19013 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT4P19013 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT4P19013 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT4P19013 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
KRT4P19013 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT4P19013 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
KRT4P19013 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KRT4P19013 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT4P19013 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 AP005117.1-202ENST00000581724 1908 ntBASIC16.72■□□□□ 0.27
KRT4P19013 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT4P19013 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT4P19013 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
KRT4P19013 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 REXO1L8P-201ENST00000604378 1897 ntBASIC16.72■□□□□ 0.27
KRT4P19013 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT4P19013 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KRT4P19013 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT4P19013 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.72■□□□□ 0.27
KRT4P19013 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.72■□□□□ 0.27
KRT4P19013 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.72■□□□□ 0.27
KRT4P19013 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.72■□□□□ 0.27
KRT4P19013 Z69720.1-201ENST00000601483 472 ntBASIC16.72■□□□□ 0.27
KRT4P19013 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT4P19013 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT4P19013 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.72■□□□□ 0.27
KRT4P19013 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
KRT4P19013 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT4P19013 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT4P19013 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
KRT4P19013 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KRT4P19013 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT4P19013 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT4P19013 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT4P19013 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT4P19013 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.71■□□□□ 0.27
KRT4P19013 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT4P19013 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT4P19013 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT4P19013 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT4P19013 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT4P19013 NSUN5P1-202ENST00000421140 1535 ntBASIC16.71■□□□□ 0.27
KRT4P19013 NSUN5P2-203ENST00000457352 1529 ntBASIC16.71■□□□□ 0.27
KRT4P19013 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.71■□□□□ 0.27
KRT4P19013 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
KRT4P19013 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
KRT4P19013 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT4P19013 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT4P19013 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT4P19013 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT4P19013 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.71■□□□□ 0.27
KRT4P19013 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.71■□□□□ 0.27
KRT4P19013 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.71■□□□□ 0.27
KRT4P19013 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT4P19013 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT4P19013 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT4P19013 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.71■□□□□ 0.27
KRT4P19013 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
KRT4P19013 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.71■□□□□ 0.27
KRT4P19013 AC073592.4-201ENST00000623827 446 ntBASIC16.71■□□□□ 0.27
KRT4P19013 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
KRT4P19013 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT4P19013 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT4P19013 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT4P19013 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT4P19013 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms