Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.44■□□□□ 0.38
PDGFRAP16234 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 ME2P1-201ENST00000426028 1970 ntBASIC17.44■□□□□ 0.38
PDGFRAP16234 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PDGFRAP16234 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
PDGFRAP16234 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDGFRAP16234 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.43■□□□□ 0.38
PDGFRAP16234 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.43■□□□□ 0.38
PDGFRAP16234 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
PDGFRAP16234 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PDGFRAP16234 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
PDGFRAP16234 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
PDGFRAP16234 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.43■□□□□ 0.38
PDGFRAP16234 AC004832.2-201ENST00000426397 482 ntBASIC17.43■□□□□ 0.38
PDGFRAP16234 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.43■□□□□ 0.38
PDGFRAP16234 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.43■□□□□ 0.38
PDGFRAP16234 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.43■□□□□ 0.38
PDGFRAP16234 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
PDGFRAP16234 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.43■□□□□ 0.38
PDGFRAP16234 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.43■□□□□ 0.38
PDGFRAP16234 KRT19P2-202ENST00000557173 1012 ntBASIC17.43■□□□□ 0.38
PDGFRAP16234 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.43■□□□□ 0.38
PDGFRAP16234 AC010327.4-202ENST00000591484 748 ntBASIC17.43■□□□□ 0.38
PDGFRAP16234 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 AL031055.1-201ENST00000606362 631 ntBASIC17.43■□□□□ 0.38
PDGFRAP16234 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PDGFRAP16234 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.43■□□□□ 0.38
PDGFRAP16234 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PDGFRAP16234 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDGFRAP16234 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PDGFRAP16234 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PDGFRAP16234 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.42■□□□□ 0.38
PDGFRAP16234 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PDGFRAP16234 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDGFRAP16234 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDGFRAP16234 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.42■□□□□ 0.38
PDGFRAP16234 AC092364.2-201ENST00000596710 2692 ntBASIC17.42■□□□□ 0.38
PDGFRAP16234 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.42■□□□□ 0.38
PDGFRAP16234 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.42■□□□□ 0.38
PDGFRAP16234 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.42■□□□□ 0.38
PDGFRAP16234 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PDGFRAP16234 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.42■□□□□ 0.38
PDGFRAP16234 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDGFRAP16234 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.42■□□□□ 0.38
PDGFRAP16234 PMS2P4-201ENST00000412466 1052 ntBASIC17.42■□□□□ 0.38
PDGFRAP16234 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.42■□□□□ 0.38
PDGFRAP16234 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.42■□□□□ 0.38
PDGFRAP16234 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
PDGFRAP16234 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.42■□□□□ 0.38
PDGFRAP16234 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.42■□□□□ 0.38
PDGFRAP16234 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDGFRAP16234 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PDGFRAP16234 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.42■□□□□ 0.38
PDGFRAP16234 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.42■□□□□ 0.38
PDGFRAP16234 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.42■□□□□ 0.38
PDGFRAP16234 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDGFRAP16234 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDGFRAP16234 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.42■□□□□ 0.38
PDGFRAP16234 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PDGFRAP16234 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDGFRAP16234 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PDGFRAP16234 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PDGFRAP16234 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.42■□□□□ 0.38
PDGFRAP16234 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDGFRAP16234 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDGFRAP16234 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PDGFRAP16234 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.42■□□□□ 0.38
PDGFRAP16234 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.42■□□□□ 0.38
PDGFRAP16234 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDGFRAP16234 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.42■□□□□ 0.38
PDGFRAP16234 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.42■□□□□ 0.38
PDGFRAP16234 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.41■□□□□ 0.38
PDGFRAP16234 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFRAP16234 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFRAP16234 PCDH8P1-201ENST00000428983 2773 ntBASIC17.41■□□□□ 0.38
PDGFRAP16234 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFRAP16234 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PDGFRAP16234 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.41■□□□□ 0.38
PDGFRAP16234 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFRAP16234 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms