Protein–RNA interactions for Protein: P11586

MTHFD1, C-1-tetrahydrofolate synthase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P11586 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.47■□□□□ 0.23
MTHFD1P11586 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.47■□□□□ 0.23
MTHFD1P11586 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.47■□□□□ 0.23
MTHFD1P11586 AL645728.2-201ENST00000641974 660 ntBASIC16.47■□□□□ 0.23
MTHFD1P11586 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MTHFD1P11586 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MTHFD1P11586 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.47■□□□□ 0.23
MTHFD1P11586 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MTHFD1P11586 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MTHFD1P11586 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MTHFD1P11586 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MTHFD1P11586 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.47■□□□□ 0.23
MTHFD1P11586 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MTHFD1P11586 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MTHFD1P11586 AC006449.5-201ENST00000610658 2098 ntBASIC16.47■□□□□ 0.23
MTHFD1P11586 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.47■□□□□ 0.23
MTHFD1P11586 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
MTHFD1P11586 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MTHFD1P11586 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
MTHFD1P11586 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MTHFD1P11586 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
MTHFD1P11586 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MTHFD1P11586 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
MTHFD1P11586 PCDHB17P-201ENST00000539533 2393 ntBASIC16.46■□□□□ 0.23
MTHFD1P11586 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
MTHFD1P11586 AC092068.3-201ENST00000587894 2016 ntBASIC16.46■□□□□ 0.23
MTHFD1P11586 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
MTHFD1P11586 TUBB8P12-201ENST00000308911 1335 ntBASIC16.46■□□□□ 0.23
MTHFD1P11586 TUBB7P-202ENST00000428444 1305 ntBASIC16.46■□□□□ 0.23
MTHFD1P11586 TUBB8P7-204ENST00000567960 1332 ntBASIC16.46■□□□□ 0.23
MTHFD1P11586 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
MTHFD1P11586 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
MTHFD1P11586 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.46■□□□□ 0.23
MTHFD1P11586 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.46■□□□□ 0.23
MTHFD1P11586 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.46■□□□□ 0.23
MTHFD1P11586 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.46■□□□□ 0.23
MTHFD1P11586 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.46■□□□□ 0.23
MTHFD1P11586 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.46■□□□□ 0.23
MTHFD1P11586 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
MTHFD1P11586 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.46■□□□□ 0.23
MTHFD1P11586 AC074386.1-202ENST00000463561 864 ntBASIC16.46■□□□□ 0.23
MTHFD1P11586 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.46■□□□□ 0.23
MTHFD1P11586 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.46■□□□□ 0.23
MTHFD1P11586 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.46■□□□□ 0.23
MTHFD1P11586 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.46■□□□□ 0.23
MTHFD1P11586 MIR3687-2-201ENST00000577708 61 ntBASIC16.46■□□□□ 0.23
MTHFD1P11586 MIR4515-201ENST00000584082 81 ntBASIC16.46■□□□□ 0.23
MTHFD1P11586 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.46■□□□□ 0.23
MTHFD1P11586 MIR3687-1-201ENST00000614492 61 ntBASIC16.46■□□□□ 0.23
MTHFD1P11586 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.46■□□□□ 0.23
MTHFD1P11586 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.46■□□□□ 0.23
MTHFD1P11586 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
MTHFD1P11586 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.46■□□□□ 0.23
MTHFD1P11586 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MTHFD1P11586 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.46■□□□□ 0.23
MTHFD1P11586 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
MTHFD1P11586 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.46■□□□□ 0.22
MTHFD1P11586 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MTHFD1P11586 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
MTHFD1P11586 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
MTHFD1P11586 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
MTHFD1P11586 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
MTHFD1P11586 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFD1P11586 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFD1P11586 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFD1P11586 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFD1P11586 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.45■□□□□ 0.22
MTHFD1P11586 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFD1P11586 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFD1P11586 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFD1P11586 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFD1P11586 AC026691.1-201ENST00000602502 2017 ntBASIC16.45■□□□□ 0.22
MTHFD1P11586 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFD1P11586 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFD1P11586 RPSAP43-201ENST00000402237 625 ntBASIC16.45■□□□□ 0.22
MTHFD1P11586 MIR1233-2-201ENST00000408138 82 ntBASIC16.45■□□□□ 0.22
MTHFD1P11586 MIR1233-1-201ENST00000408722 82 ntBASIC16.45■□□□□ 0.22
MTHFD1P11586 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.45■□□□□ 0.22
MTHFD1P11586 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.45■□□□□ 0.22
MTHFD1P11586 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MTHFD1P11586 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms