Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.64□□□□□ -0.07
UBCP0CG48 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
UBCP0CG48 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 AC002310.6-201ENST00000624451 1377 ntBASIC14.64□□□□□ -0.07
UBCP0CG48 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
UBCP0CG48 AC099063.4-201ENST00000641099 1602 ntBASIC14.64□□□□□ -0.07
UBCP0CG48 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.64□□□□□ -0.07
UBCP0CG48 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.64□□□□□ -0.07
UBCP0CG48 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.64□□□□□ -0.07
UBCP0CG48 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.64□□□□□ -0.07
UBCP0CG48 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.64□□□□□ -0.07
UBCP0CG48 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.64□□□□□ -0.07
UBCP0CG48 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
UBCP0CG48 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.64□□□□□ -0.07
UBCP0CG48 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.64□□□□□ -0.07
UBCP0CG48 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.64□□□□□ -0.07
UBCP0CG48 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.64□□□□□ -0.07
UBCP0CG48 AC092119.3-201ENST00000612618 583 ntBASIC14.64□□□□□ -0.07
UBCP0CG48 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
UBCP0CG48 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.64□□□□□ -0.07
UBCP0CG48 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.64□□□□□ -0.07
UBCP0CG48 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.64□□□□□ -0.07
UBCP0CG48 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.64□□□□□ -0.07
UBCP0CG48 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
UBCP0CG48 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
UBCP0CG48 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.63□□□□□ -0.07
UBCP0CG48 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.63□□□□□ -0.07
UBCP0CG48 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.63□□□□□ -0.07
UBCP0CG48 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.63□□□□□ -0.07
UBCP0CG48 AC132008.2-207ENST00000454517 770 ntBASIC14.63□□□□□ -0.07
UBCP0CG48 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.63□□□□□ -0.07
UBCP0CG48 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.63□□□□□ -0.07
UBCP0CG48 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.63□□□□□ -0.07
UBCP0CG48 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.63□□□□□ -0.07
UBCP0CG48 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.63□□□□□ -0.07
UBCP0CG48 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
UBCP0CG48 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
UBCP0CG48 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
UBCP0CG48 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
UBCP0CG48 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.63□□□□□ -0.07
UBCP0CG48 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
UBCP0CG48 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
UBCP0CG48 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBCP0CG48 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.62□□□□□ -0.07
UBCP0CG48 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.62□□□□□ -0.07
UBCP0CG48 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 AC024909.3-201ENST00000611513 2257 ntBASIC14.62□□□□□ -0.07
UBCP0CG48 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
UBCP0CG48 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBCP0CG48 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms