Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNYL3P0C7X3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNYL3P0C7X3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNYL3P0C7X3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.09■□□□□ 0.17
CCNYL3P0C7X3 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.09■□□□□ 0.17
CCNYL3P0C7X3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCNYL3P0C7X3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNYL3P0C7X3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.08■□□□□ 0.17
CCNYL3P0C7X3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCNYL3P0C7X3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCNYL3P0C7X3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCNYL3P0C7X3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCNYL3P0C7X3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.08■□□□□ 0.17
CCNYL3P0C7X3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCNYL3P0C7X3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCNYL3P0C7X3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CCNYL3P0C7X3 AL596257.1-201ENST00000641463 2694 ntBASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 AL671277.1-201ENST00000429656 993 ntBASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 RN7SL275P-201ENST00000582762 335 ntBASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 AC092919.2-201ENST00000623631 1645 ntBASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 PCDH8P1-201ENST00000428983 2773 ntBASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNYL3P0C7X3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 AL513477.1-201ENST00000602865 2407 ntBASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 SPDYE11-202ENST00000450699 704 ntBASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 TIMM8BP1-201ENST00000452384 211 ntBASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 SPDYE9P-201ENST00000570642 692 ntBASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 SPDYE10P-202ENST00000612005 668 ntBASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 SPDYE8P-202ENST00000612377 668 ntBASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CCNYL3P0C7X3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCNYL3P0C7X3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCNYL3P0C7X3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCNYL3P0C7X3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCNYL3P0C7X3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCNYL3P0C7X3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCNYL3P0C7X3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms