Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
RBP1P09455 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RBP1P09455 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.41■□□□□ 0.22
RBP1P09455 HCG4-201ENST00000418983 998 ntBASIC16.41■□□□□ 0.22
RBP1P09455 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.41■□□□□ 0.22
RBP1P09455 SAPCD2P3-201ENST00000455031 850 ntBASIC16.41■□□□□ 0.22
RBP1P09455 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.41■□□□□ 0.22
RBP1P09455 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.41■□□□□ 0.22
RBP1P09455 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.41■□□□□ 0.22
RBP1P09455 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.41■□□□□ 0.22
RBP1P09455 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.41■□□□□ 0.22
RBP1P09455 AC107918.4-202ENST00000641623 219 ntBASIC16.41■□□□□ 0.22
RBP1P09455 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
RBP1P09455 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.41■□□□□ 0.22
RBP1P09455 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.41■□□□□ 0.22
RBP1P09455 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.41■□□□□ 0.22
RBP1P09455 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RBP1P09455 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RBP1P09455 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBP1P09455 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RBP1P09455 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RBP1P09455 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.4■□□□□ 0.22
RBP1P09455 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.4■□□□□ 0.22
RBP1P09455 RPS15P9-201ENST00000494093 319 ntBASIC16.4■□□□□ 0.22
RBP1P09455 AC107918.2-201ENST00000530817 355 ntBASIC16.4■□□□□ 0.22
RBP1P09455 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.4■□□□□ 0.22
RBP1P09455 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.4■□□□□ 0.22
RBP1P09455 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.4■□□□□ 0.22
RBP1P09455 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.4■□□□□ 0.22
RBP1P09455 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.4■□□□□ 0.22
RBP1P09455 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.4■□□□□ 0.22
RBP1P09455 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.4■□□□□ 0.22
RBP1P09455 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RBP1P09455 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.4■□□□□ 0.22
RBP1P09455 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RBP1P09455 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.4■□□□□ 0.22
RBP1P09455 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBP1P09455 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.4■□□□□ 0.22
RBP1P09455 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
RBP1P09455 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RBP1P09455 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
RBP1P09455 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RBP1P09455 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RBP1P09455 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RBP1P09455 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RBP1P09455 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RBP1P09455 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBP1P09455 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
RBP1P09455 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RBP1P09455 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
RBP1P09455 MIR1224-201ENST00000408193 85 ntBASIC16.39■□□□□ 0.21
RBP1P09455 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.39■□□□□ 0.21
RBP1P09455 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.39■□□□□ 0.21
RBP1P09455 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.39■□□□□ 0.21
RBP1P09455 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.39■□□□□ 0.21
RBP1P09455 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms