Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC012313.10-201ENST00000623509 926 ntBASIC15.01□□□□□ -0.01
HLA-DPB1P04440 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 AC023824.1-201ENST00000562945 2975 ntBASIC15.01□□□□□ -0.01
HLA-DPB1P04440 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DPB1P04440 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HLA-DPB1P04440 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 AL596087.1-201ENST00000400979 1969 ntBASIC15□□□□□ -0.01
HLA-DPB1P04440 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15□□□□□ -0.01
HLA-DPB1P04440 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 INTS4P1-201ENST00000438455 1935 ntBASIC15□□□□□ -0.01
HLA-DPB1P04440 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15□□□□□ -0.01
HLA-DPB1P04440 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HLA-DPB1P04440 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DPB1P04440 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HLA-DPB1P04440 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15□□□□□ -0.01
HLA-DPB1P04440 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 POM121L3P-201ENST00000419331 1163 ntBASIC15□□□□□ -0.01
HLA-DPB1P04440 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HLA-DPB1P04440 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15□□□□□ -0.01
HLA-DPB1P04440 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15□□□□□ -0.01
HLA-DPB1P04440 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DPB1P04440 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DPB1P04440 AC114341.1-201ENST00000618070 349 ntBASIC15□□□□□ -0.01
HLA-DPB1P04440 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DPB1P04440 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HLA-DPB1P04440 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DPB1P04440 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 KRT8P10-201ENST00000450021 1447 ntBASIC15□□□□□ -0.01
HLA-DPB1P04440 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
HLA-DPB1P04440 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DPB1P04440 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DPB1P04440 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DPB1P04440 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DPB1P04440 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 LINC00895-201ENST00000629028 1637 ntBASIC14.99□□□□□ -0.01
HLA-DPB1P04440 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 AC092850.2-201ENST00000623821 2697 ntBASIC14.99□□□□□ -0.01
HLA-DPB1P04440 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 MIR5100-201ENST00000579544 119 ntBASIC14.99□□□□□ -0.01
HLA-DPB1P04440 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-DPB1P04440 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms