Protein–RNA interactions for Protein: P04433

IGKV3-11, Immunoglobulin kappa variable 3-11, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-11P04433 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGKV3-11P04433 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
IGKV3-11P04433 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGKV3-11P04433 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.29■□□□□ 0.04
IGKV3-11P04433 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.29■□□□□ 0.04
IGKV3-11P04433 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGKV3-11P04433 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGKV3-11P04433 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGKV3-11P04433 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
IGKV3-11P04433 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGKV3-11P04433 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.29■□□□□ 0.04
IGKV3-11P04433 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
IGKV3-11P04433 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGKV3-11P04433 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
IGKV3-11P04433 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
IGKV3-11P04433 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGKV3-11P04433 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGKV3-11P04433 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
IGKV3-11P04433 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.29■□□□□ 0.04
IGKV3-11P04433 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IGKV3-11P04433 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.28■□□□□ 0.04
IGKV3-11P04433 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 AC005237.2-201ENST00000434368 219 ntBASIC15.28■□□□□ 0.04
IGKV3-11P04433 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 POU5F1P6-201ENST00000466990 990 ntBASIC15.28■□□□□ 0.04
IGKV3-11P04433 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 AC009093.7-201ENST00000623853 1223 ntBASIC15.28■□□□□ 0.04
IGKV3-11P04433 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
IGKV3-11P04433 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IGKV3-11P04433 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IGKV3-11P04433 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IGKV3-11P04433 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IGKV3-11P04433 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
IGKV3-11P04433 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.27■□□□□ 0.04
IGKV3-11P04433 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IGKV3-11P04433 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.27■□□□□ 0.04
IGKV3-11P04433 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
IGKV3-11P04433 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.27■□□□□ 0.04
IGKV3-11P04433 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IGKV3-11P04433 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IGKV3-11P04433 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.27■□□□□ 0.04
IGKV3-11P04433 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.27■□□□□ 0.04
IGKV3-11P04433 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IGKV3-11P04433 FAM58DP-201ENST00000428076 619 ntBASIC15.27■□□□□ 0.04
IGKV3-11P04433 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.27■□□□□ 0.04
IGKV3-11P04433 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.27■□□□□ 0.04
IGKV3-11P04433 AC023141.5-201ENST00000458585 616 ntBASIC15.27■□□□□ 0.04
IGKV3-11P04433 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.27■□□□□ 0.04
IGKV3-11P04433 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.27■□□□□ 0.04
IGKV3-11P04433 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.27■□□□□ 0.04
IGKV3-11P04433 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.27■□□□□ 0.04
IGKV3-11P04433 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.27■□□□□ 0.04
IGKV3-11P04433 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.27■□□□□ 0.04
IGKV3-11P04433 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
IGKV3-11P04433 AC005052.1-201ENST00000625181 2492 ntBASIC15.27■□□□□ 0.03
IGKV3-11P04433 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
IGKV3-11P04433 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
IGKV3-11P04433 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IGKV3-11P04433 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IGKV3-11P04433 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
IGKV3-11P04433 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.27■□□□□ 0.03
IGKV3-11P04433 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms