Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SPTA1P02549 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SPTA1P02549 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPTA1P02549 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPTA1P02549 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SPTA1P02549 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPTA1P02549 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPTA1P02549 SLC25A24-204ENST00000569674 2357 ntBASIC14.98□□□□□ -0.01
SPTA1P02549 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPTA1P02549 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPTA1P02549 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPTA1P02549 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.98□□□□□ -0.01
SPTA1P02549 AL583810.1-201ENST00000553344 1045 ntBASIC14.98□□□□□ -0.01
SPTA1P02549 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.98□□□□□ -0.01
SPTA1P02549 SRD5A3P1-201ENST00000603021 949 ntBASIC14.98□□□□□ -0.01
SPTA1P02549 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPTA1P02549 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.98□□□□□ -0.01
SPTA1P02549 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SPTA1P02549 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.98□□□□□ -0.01
SPTA1P02549 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPTA1P02549 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.98□□□□□ -0.01
SPTA1P02549 AP000974.1-201ENST00000623909 2387 ntBASIC14.98□□□□□ -0.01
SPTA1P02549 AC093503.3-201ENST00000624917 2352 ntBASIC14.98□□□□□ -0.01
SPTA1P02549 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPTA1P02549 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.98□□□□□ -0.01
SPTA1P02549 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SPTA1P02549 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 AC079328.2-201ENST00000561241 3354 ntBASIC14.97□□□□□ -0.01
SPTA1P02549 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.97□□□□□ -0.01
SPTA1P02549 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.97□□□□□ -0.01
SPTA1P02549 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.97□□□□□ -0.01
SPTA1P02549 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
SPTA1P02549 MBP-227ENST00000526111 581 ntTSL 4 BASIC14.97□□□□□ -0.01
SPTA1P02549 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.97□□□□□ -0.01
SPTA1P02549 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.97□□□□□ -0.01
SPTA1P02549 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SPTA1P02549 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SPTA1P02549 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
SPTA1P02549 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SPTA1P02549 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.97□□□□□ -0.01
SPTA1P02549 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SPTA1P02549 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SPTA1P02549 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.97□□□□□ -0.01
SPTA1P02549 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SPTA1P02549 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.97□□□□□ -0.01
SPTA1P02549 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SPTA1P02549 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.97□□□□□ -0.01
SPTA1P02549 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.97□□□□□ -0.01
SPTA1P02549 CYP2A7P1-201ENST00000595391 815 ntBASIC14.97□□□□□ -0.01
SPTA1P02549 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 NOC2LP1-202ENST00000452600 2235 ntBASIC14.97□□□□□ -0.01
SPTA1P02549 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 AC018665.1-201ENST00000622927 1362 ntBASIC14.97□□□□□ -0.01
SPTA1P02549 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPTA1P02549 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SPTA1P02549 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SPTA1P02549 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SPTA1P02549 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPTA1P02549 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.96□□□□□ -0.01
SPTA1P02549 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPTA1P02549 MPRIPP1-201ENST00000452433 1089 ntBASIC14.96□□□□□ -0.01
SPTA1P02549 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.96□□□□□ -0.01
SPTA1P02549 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.96□□□□□ -0.01
SPTA1P02549 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.96□□□□□ -0.01
SPTA1P02549 AC010319.3-201ENST00000597028 470 ntBASIC14.96□□□□□ -0.01
SPTA1P02549 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.96□□□□□ -0.01
SPTA1P02549 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPTA1P02549 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SPTA1P02549 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPTA1P02549 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPTA1P02549 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SPTA1P02549 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPTA1P02549 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SPTA1P02549 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SPTA1P02549 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPTA1P02549 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPTA1P02549 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SPTA1P02549 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
SPTA1P02549 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
SPTA1P02549 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPTA1P02549 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.96□□□□□ -0.01
SPTA1P02549 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms