Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.49■□□□□ 0.23
PDGFBP01127 AC024267.1-201ENST00000582320 895 ntBASIC16.49■□□□□ 0.23
PDGFBP01127 AC091271.1-201ENST00000611877 1162 ntBASIC16.49■□□□□ 0.23
PDGFBP01127 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PDGFBP01127 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFBP01127 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFBP01127 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFBP01127 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFBP01127 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFBP01127 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PDGFBP01127 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PDGFBP01127 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.48■□□□□ 0.23
PDGFBP01127 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PDGFBP01127 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
PDGFBP01127 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.48■□□□□ 0.23
PDGFBP01127 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.48■□□□□ 0.23
PDGFBP01127 AL162726.2-201ENST00000438986 1017 ntBASIC16.48■□□□□ 0.23
PDGFBP01127 KRT8P13-201ENST00000463294 1010 ntBASIC16.48■□□□□ 0.23
PDGFBP01127 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
PDGFBP01127 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.48■□□□□ 0.23
PDGFBP01127 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.48■□□□□ 0.23
PDGFBP01127 AC079328.1-201ENST00000560358 952 ntBASIC16.48■□□□□ 0.23
PDGFBP01127 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.48■□□□□ 0.23
PDGFBP01127 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.48■□□□□ 0.23
PDGFBP01127 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.48■□□□□ 0.23
PDGFBP01127 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.48■□□□□ 0.23
PDGFBP01127 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PDGFBP01127 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PDGFBP01127 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.48■□□□□ 0.23
PDGFBP01127 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.48■□□□□ 0.23
PDGFBP01127 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFBP01127 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.48■□□□□ 0.23
PDGFBP01127 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PDGFBP01127 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PDGFBP01127 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.48■□□□□ 0.23
PDGFBP01127 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.47■□□□□ 0.23
PDGFBP01127 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PDGFBP01127 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PDGFBP01127 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PDGFBP01127 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.47■□□□□ 0.23
PDGFBP01127 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.47■□□□□ 0.23
PDGFBP01127 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.47■□□□□ 0.23
PDGFBP01127 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.47■□□□□ 0.23
PDGFBP01127 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.47■□□□□ 0.23
PDGFBP01127 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.47■□□□□ 0.23
PDGFBP01127 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.47■□□□□ 0.23
PDGFBP01127 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PDGFBP01127 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.47■□□□□ 0.23
PDGFBP01127 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.47■□□□□ 0.23
PDGFBP01127 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.47■□□□□ 0.23
PDGFBP01127 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.47■□□□□ 0.23
PDGFBP01127 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFBP01127 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PDGFBP01127 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.46■□□□□ 0.23
PDGFBP01127 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PDGFBP01127 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFBP01127 AC090340.1-201ENST00000620778 4980 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms