Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CPNE6O95741 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.34■□□□□ 0.21
CPNE6O95741 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CPNE6O95741 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE6O95741 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
CPNE6O95741 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.34■□□□□ 0.21
CPNE6O95741 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.33■□□□□ 0.21
CPNE6O95741 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE6O95741 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CPNE6O95741 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE6O95741 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE6O95741 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.33■□□□□ 0.21
CPNE6O95741 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE6O95741 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE6O95741 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CPNE6O95741 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE6O95741 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE6O95741 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE6O95741 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CPNE6O95741 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE6O95741 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE6O95741 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.33■□□□□ 0.2
CPNE6O95741 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.33■□□□□ 0.2
CPNE6O95741 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CPNE6O95741 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
CPNE6O95741 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.33■□□□□ 0.2
CPNE6O95741 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CPNE6O95741 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.33■□□□□ 0.2
CPNE6O95741 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.33■□□□□ 0.2
CPNE6O95741 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CPNE6O95741 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE6O95741 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.33■□□□□ 0.2
CPNE6O95741 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.33■□□□□ 0.2
CPNE6O95741 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE6O95741 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE6O95741 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE6O95741 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE6O95741 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CPNE6O95741 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CPNE6O95741 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE6O95741 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.33■□□□□ 0.2
CPNE6O95741 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE6O95741 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE6O95741 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CPNE6O95741 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE6O95741 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CPNE6O95741 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CPNE6O95741 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CPNE6O95741 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CPNE6O95741 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE6O95741 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CPNE6O95741 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CPNE6O95741 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 AL627223.1-201ENST00000416693 442 ntBASIC16.32■□□□□ 0.2
CPNE6O95741 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.32■□□□□ 0.2
CPNE6O95741 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE6O95741 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE6O95741 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE6O95741 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.32■□□□□ 0.2
CPNE6O95741 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.32■□□□□ 0.2
CPNE6O95741 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE6O95741 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE6O95741 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE6O95741 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CPNE6O95741 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
CPNE6O95741 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 AC011467.4-201ENST00000594891 528 ntBASIC16.32■□□□□ 0.2
CPNE6O95741 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE6O95741 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 AL161645.1-201ENST00000622716 1255 ntBASIC16.32■□□□□ 0.2
CPNE6O95741 LINC00628-201ENST00000628516 1289 ntBASIC16.32■□□□□ 0.2
CPNE6O95741 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE6O95741 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
CPNE6O95741 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE6O95741 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE6O95741 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.31■□□□□ 0.2
CPNE6O95741 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.31■□□□□ 0.2
CPNE6O95741 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE6O95741 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE6O95741 AC022188.1-201ENST00000620960 1664 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms