Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD4O95243 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.76■□□□□ 0.75
MBD4O95243 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.76■□□□□ 0.75
MBD4O95243 AL645939.2-201ENST00000427340 991 ntBASIC19.76■□□□□ 0.75
MBD4O95243 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.76■□□□□ 0.75
MBD4O95243 RFPL4AP1-201ENST00000530883 850 ntBASIC19.76■□□□□ 0.75
MBD4O95243 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
MBD4O95243 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.76■□□□□ 0.75
MBD4O95243 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.76■□□□□ 0.75
MBD4O95243 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.76■□□□□ 0.75
MBD4O95243 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.76■□□□□ 0.75
MBD4O95243 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.76■□□□□ 0.75
MBD4O95243 AC106028.4-201ENST00000614509 607 ntBASIC19.76■□□□□ 0.75
MBD4O95243 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.76■□□□□ 0.75
MBD4O95243 Z92544.3-201ENST00000624747 417 ntBASIC19.76■□□□□ 0.75
MBD4O95243 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD4O95243 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MBD4O95243 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MBD4O95243 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD4O95243 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD4O95243 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD4O95243 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD4O95243 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD4O95243 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
MBD4O95243 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
MBD4O95243 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD4O95243 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
MBD4O95243 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD4O95243 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD4O95243 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
MBD4O95243 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
MBD4O95243 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
MBD4O95243 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.75■□□□□ 0.75
MBD4O95243 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.75■□□□□ 0.75
MBD4O95243 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
MBD4O95243 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
MBD4O95243 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.75■□□□□ 0.75
MBD4O95243 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.75■□□□□ 0.75
MBD4O95243 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.75■□□□□ 0.75
MBD4O95243 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.75■□□□□ 0.75
MBD4O95243 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.75■□□□□ 0.75
MBD4O95243 ALG1L8P-201ENST00000533887 760 ntBASIC19.75■□□□□ 0.75
MBD4O95243 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.75■□□□□ 0.75
MBD4O95243 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
MBD4O95243 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD4O95243 AP001059.3-201ENST00000619053 235 ntBASIC19.75■□□□□ 0.75
MBD4O95243 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
MBD4O95243 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD4O95243 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.75■□□□□ 0.75
MBD4O95243 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD4O95243 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD4O95243 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD4O95243 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.75■□□□□ 0.75
MBD4O95243 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD4O95243 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.75■□□□□ 0.75
MBD4O95243 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
MBD4O95243 PCGF3-213ENST00000620529 1899 ntBASIC19.75■□□□□ 0.75
MBD4O95243 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.75■□□□□ 0.75
MBD4O95243 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.75■□□□□ 0.75
MBD4O95243 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
MBD4O95243 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MBD4O95243 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD4O95243 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
MBD4O95243 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.74■□□□□ 0.75
MBD4O95243 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD4O95243 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
MBD4O95243 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.74■□□□□ 0.75
MBD4O95243 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MBD4O95243 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.74■□□□□ 0.75
MBD4O95243 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.74■□□□□ 0.75
MBD4O95243 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.74■□□□□ 0.75
MBD4O95243 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.74■□□□□ 0.75
MBD4O95243 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
MBD4O95243 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
MBD4O95243 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.74■□□□□ 0.75
MBD4O95243 AC025678.2-201ENST00000562061 970 ntBASIC19.74■□□□□ 0.75
MBD4O95243 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD4O95243 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.74■□□□□ 0.75
MBD4O95243 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.74■□□□□ 0.75
MBD4O95243 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD4O95243 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
MBD4O95243 NKILA-202ENST00000614771 2598 ntBASIC19.74■□□□□ 0.75
MBD4O95243 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD4O95243 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD4O95243 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.73■□□□□ 0.75
MBD4O95243 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.73■□□□□ 0.75
MBD4O95243 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.73■□□□□ 0.75
MBD4O95243 AC093724.1-201ENST00000448659 1027 ntBASIC19.73■□□□□ 0.75
MBD4O95243 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD4O95243 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.73■□□□□ 0.75
MBD4O95243 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms