Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SEMA3DO95025 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.97■□□□□ 0.15
SEMA3DO95025 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SEMA3DO95025 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SEMA3DO95025 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SEMA3DO95025 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.97■□□□□ 0.15
SEMA3DO95025 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SEMA3DO95025 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.97■□□□□ 0.15
SEMA3DO95025 AL512652.2-201ENST00000625156 1716 ntBASIC15.97■□□□□ 0.15
SEMA3DO95025 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.96■□□□□ 0.15
SEMA3DO95025 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SEMA3DO95025 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SEMA3DO95025 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SEMA3DO95025 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SEMA3DO95025 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
SEMA3DO95025 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SEMA3DO95025 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SEMA3DO95025 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.96■□□□□ 0.15
SEMA3DO95025 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SEMA3DO95025 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.96■□□□□ 0.15
SEMA3DO95025 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.96■□□□□ 0.15
SEMA3DO95025 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.96■□□□□ 0.15
SEMA3DO95025 AC009947.1-201ENST00000444350 727 ntBASIC15.96■□□□□ 0.15
SEMA3DO95025 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.96■□□□□ 0.15
SEMA3DO95025 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SEMA3DO95025 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SEMA3DO95025 AC009078.2-202ENST00000463353 338 ntBASIC15.96■□□□□ 0.15
SEMA3DO95025 IGHV3-22-201ENST00000520721 359 ntBASIC15.96■□□□□ 0.15
SEMA3DO95025 UNC93B6-202ENST00000528242 690 ntBASIC15.96■□□□□ 0.15
SEMA3DO95025 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.96■□□□□ 0.15
SEMA3DO95025 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.96■□□□□ 0.15
SEMA3DO95025 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SEMA3DO95025 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.96■□□□□ 0.15
SEMA3DO95025 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SEMA3DO95025 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SEMA3DO95025 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.96■□□□□ 0.15
SEMA3DO95025 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SEMA3DO95025 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SEMA3DO95025 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SEMA3DO95025 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SEMA3DO95025 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.96■□□□□ 0.14
SEMA3DO95025 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SEMA3DO95025 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SEMA3DO95025 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
SEMA3DO95025 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SEMA3DO95025 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 HLA-A-201ENST00000376802 1334 ntBASIC15.95■□□□□ 0.14
SEMA3DO95025 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.95■□□□□ 0.14
SEMA3DO95025 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.95■□□□□ 0.14
SEMA3DO95025 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 AC012569.1-201ENST00000591191 1524 ntBASIC15.95■□□□□ 0.14
SEMA3DO95025 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.95■□□□□ 0.14
SEMA3DO95025 VN2R19P-201ENST00000442399 1052 ntBASIC15.95■□□□□ 0.14
SEMA3DO95025 CXCL1P1-201ENST00000502804 216 ntBASIC15.95■□□□□ 0.14
SEMA3DO95025 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SEMA3DO95025 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.95■□□□□ 0.14
SEMA3DO95025 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.95■□□□□ 0.14
SEMA3DO95025 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.95■□□□□ 0.14
SEMA3DO95025 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SEMA3DO95025 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
SEMA3DO95025 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.95■□□□□ 0.14
SEMA3DO95025 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.95■□□□□ 0.14
SEMA3DO95025 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.95■□□□□ 0.14
SEMA3DO95025 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SEMA3DO95025 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
SEMA3DO95025 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SEMA3DO95025 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SEMA3DO95025 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SEMA3DO95025 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEMA3DO95025 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.94■□□□□ 0.14
SEMA3DO95025 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEMA3DO95025 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEMA3DO95025 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.94■□□□□ 0.14
SEMA3DO95025 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.94■□□□□ 0.14
SEMA3DO95025 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SEMA3DO95025 AL671710.1-201ENST00000610245 2349 ntBASIC15.94■□□□□ 0.14
SEMA3DO95025 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SEMA3DO95025 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEMA3DO95025 LINC02199-201ENST00000506655 2702 ntBASIC15.94■□□□□ 0.14
SEMA3DO95025 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.94■□□□□ 0.14
SEMA3DO95025 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SEMA3DO95025 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.94■□□□□ 0.14
SEMA3DO95025 RNA5SP415-201ENST00000517246 115 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms