Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC11.22□□□□□ -0.61
SNCGO76070 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC11.22□□□□□ -0.61
SNCGO76070 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SNCGO76070 DDX43P3-201ENST00000441064 443 ntBASIC11.22□□□□□ -0.61
SNCGO76070 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC11.22□□□□□ -0.61
SNCGO76070 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.22□□□□□ -0.61
SNCGO76070 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SNCGO76070 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SNCGO76070 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SNCGO76070 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC11.22□□□□□ -0.61
SNCGO76070 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC11.22□□□□□ -0.61
SNCGO76070 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SNCGO76070 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC11.22□□□□□ -0.61
SNCGO76070 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SNCGO76070 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SNCGO76070 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC11.22□□□□□ -0.61
SNCGO76070 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC11.22□□□□□ -0.61
SNCGO76070 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SNCGO76070 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SNCGO76070 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC11.22□□□□□ -0.61
SNCGO76070 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SNCGO76070 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC11.22□□□□□ -0.61
SNCGO76070 HLA-B-256ENST00000639848 1089 ntBASIC11.22□□□□□ -0.61
SNCGO76070 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SNCGO76070 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SNCGO76070 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SNCGO76070 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.22□□□□□ -0.61
SNCGO76070 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SNCGO76070 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.22□□□□□ -0.61
SNCGO76070 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SNCGO76070 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SNCGO76070 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SNCGO76070 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SNCGO76070 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC11.21□□□□□ -0.61
SNCGO76070 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC11.21□□□□□ -0.61
SNCGO76070 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
SNCGO76070 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC11.21□□□□□ -0.61
SNCGO76070 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.21□□□□□ -0.61
SNCGO76070 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC11.21□□□□□ -0.61
SNCGO76070 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC11.21□□□□□ -0.61
SNCGO76070 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
SNCGO76070 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
SNCGO76070 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC11.21□□□□□ -0.61
SNCGO76070 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 Z85996.1-201ENST00000494644 937 ntBASIC11.21□□□□□ -0.61
SNCGO76070 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC11.21□□□□□ -0.61
SNCGO76070 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC11.21□□□□□ -0.61
SNCGO76070 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC11.21□□□□□ -0.61
SNCGO76070 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
SNCGO76070 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
SNCGO76070 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC11.21□□□□□ -0.61
SNCGO76070 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC11.21□□□□□ -0.61
SNCGO76070 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
SNCGO76070 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SNCGO76070 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SNCGO76070 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.21□□□□□ -0.62
SNCGO76070 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNCGO76070 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC11.21□□□□□ -0.62
SNCGO76070 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNCGO76070 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.21□□□□□ -0.62
SNCGO76070 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNCGO76070 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
SNCGO76070 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
SNCGO76070 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
SNCGO76070 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNCGO76070 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNCGO76070 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNCGO76070 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC11.21□□□□□ -0.62
SNCGO76070 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SNCGO76070 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC11.21□□□□□ -0.62
SNCGO76070 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.21□□□□□ -0.62
SNCGO76070 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNCGO76070 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SNCGO76070 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC11.2□□□□□ -0.62
SNCGO76070 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SNCGO76070 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SNCGO76070 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SNCGO76070 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms