Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKL5O76039 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.31■□□□□ 0.68
CDKL5O76039 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CDKL5O76039 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKL5O76039 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDKL5O76039 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.31■□□□□ 0.68
CDKL5O76039 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CDKL5O76039 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.31■□□□□ 0.68
CDKL5O76039 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.31■□□□□ 0.68
CDKL5O76039 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.31■□□□□ 0.68
CDKL5O76039 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKL5O76039 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.31■□□□□ 0.68
CDKL5O76039 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.31■□□□□ 0.68
CDKL5O76039 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.31■□□□□ 0.68
CDKL5O76039 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.31■□□□□ 0.68
CDKL5O76039 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CDKL5O76039 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKL5O76039 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDKL5O76039 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL5O76039 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.3■□□□□ 0.68
CDKL5O76039 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.3■□□□□ 0.68
CDKL5O76039 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.3■□□□□ 0.68
CDKL5O76039 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.3■□□□□ 0.68
CDKL5O76039 AC079328.2-201ENST00000561241 3354 ntBASIC19.3■□□□□ 0.68
CDKL5O76039 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.3■□□□□ 0.68
CDKL5O76039 AL591424.1-201ENST00000442569 1213 ntBASIC19.3■□□□□ 0.68
CDKL5O76039 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.3■□□□□ 0.68
CDKL5O76039 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.3■□□□□ 0.68
CDKL5O76039 AC109635.5-201ENST00000533593 962 ntBASIC19.3■□□□□ 0.68
CDKL5O76039 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDKL5O76039 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 AC120114.3-201ENST00000611923 658 ntBASIC19.3■□□□□ 0.68
CDKL5O76039 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 MTHFR-217ENST00000641820 1569 ntBASIC19.3■□□□□ 0.68
CDKL5O76039 AL662844.4-201ENST00000606367 2838 ntBASIC19.3■□□□□ 0.68
CDKL5O76039 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.3■□□□□ 0.68
CDKL5O76039 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CDKL5O76039 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.3■□□□□ 0.68
CDKL5O76039 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CDKL5O76039 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL5O76039 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.29■□□□□ 0.68
CDKL5O76039 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CDKL5O76039 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL5O76039 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL5O76039 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CDKL5O76039 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL5O76039 BCAR1-209ENST00000546196 1340 ntBASIC19.29■□□□□ 0.68
CDKL5O76039 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL5O76039 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CDKL5O76039 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL5O76039 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL5O76039 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.29■□□□□ 0.68
CDKL5O76039 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL5O76039 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL5O76039 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
CDKL5O76039 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL5O76039 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL5O76039 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL5O76039 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDKL5O76039 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.29■□□□□ 0.68
CDKL5O76039 AC007967.2-201ENST00000432613 625 ntBASIC19.29■□□□□ 0.68
CDKL5O76039 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL5O76039 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.29■□□□□ 0.68
CDKL5O76039 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms