Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.02□□□□□ -0.32
ZNF253O75346 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.02□□□□□ -0.32
ZNF253O75346 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF253O75346 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.02□□□□□ -0.32
ZNF253O75346 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF253O75346 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF253O75346 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF253O75346 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
ZNF253O75346 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF253O75346 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF253O75346 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF253O75346 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.02□□□□□ -0.33
ZNF253O75346 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF253O75346 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.02□□□□□ -0.33
ZNF253O75346 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.02□□□□□ -0.33
ZNF253O75346 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF253O75346 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
ZNF253O75346 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.02□□□□□ -0.33
ZNF253O75346 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.02□□□□□ -0.33
ZNF253O75346 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF253O75346 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
ZNF253O75346 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF253O75346 AC011498.5-201ENST00000592027 486 ntBASIC13.02□□□□□ -0.33
ZNF253O75346 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ZNF253O75346 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF253O75346 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ZNF253O75346 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ZNF253O75346 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF253O75346 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ZNF253O75346 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF253O75346 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF253O75346 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF253O75346 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF253O75346 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
ZNF253O75346 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ZNF253O75346 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
ZNF253O75346 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF253O75346 ACTG1P4-201ENST00000425123 1122 ntBASIC13.01□□□□□ -0.33
ZNF253O75346 KRT18P57-201ENST00000443599 1254 ntBASIC13.01□□□□□ -0.33
ZNF253O75346 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 AC022616.7-201ENST00000525383 220 ntBASIC13.01□□□□□ -0.33
ZNF253O75346 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF253O75346 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ZNF253O75346 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ZNF253O75346 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF253O75346 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 FAM45BP-202ENST00000592932 1624 ntBASIC13.01□□□□□ -0.33
ZNF253O75346 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF253O75346 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 AC132938.5-201ENST00000624980 1813 ntBASIC13.01□□□□□ -0.33
ZNF253O75346 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF253O75346 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ZNF253O75346 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13□□□□□ -0.33
ZNF253O75346 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 AC092364.2-201ENST00000596710 2692 ntBASIC13□□□□□ -0.33
ZNF253O75346 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
ZNF253O75346 FES-204ENST00000414248 2327 ntTSL 2 BASIC13□□□□□ -0.33
ZNF253O75346 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms