Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PLOD3O60568 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PLOD3O60568 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.72■□□□□ 0.11
PLOD3O60568 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.72■□□□□ 0.11
PLOD3O60568 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PLOD3O60568 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 FAM185BP-201ENST00000443595 716 ntBASIC15.72■□□□□ 0.11
PLOD3O60568 AC009947.1-201ENST00000444350 727 ntBASIC15.72■□□□□ 0.11
PLOD3O60568 RNA5SP415-201ENST00000517246 115 ntBASIC15.72■□□□□ 0.11
PLOD3O60568 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.72■□□□□ 0.11
PLOD3O60568 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.72■□□□□ 0.11
PLOD3O60568 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.72■□□□□ 0.11
PLOD3O60568 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.72■□□□□ 0.11
PLOD3O60568 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.72■□□□□ 0.11
PLOD3O60568 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
PLOD3O60568 HYMAI-201ENST00000635591 3347 ntBASIC15.72■□□□□ 0.11
PLOD3O60568 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.72■□□□□ 0.11
PLOD3O60568 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.72■□□□□ 0.11
PLOD3O60568 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PLOD3O60568 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.71■□□□□ 0.11
PLOD3O60568 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.71■□□□□ 0.11
PLOD3O60568 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PLOD3O60568 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.71■□□□□ 0.11
PLOD3O60568 AC006538.1-201ENST00000567905 1585 ntBASIC15.71■□□□□ 0.11
PLOD3O60568 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PLOD3O60568 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.71■□□□□ 0.11
PLOD3O60568 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.71■□□□□ 0.11
PLOD3O60568 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PLOD3O60568 SLC22A20-204ENST00000530038 1673 ntBASIC15.71■□□□□ 0.11
PLOD3O60568 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.71■□□□□ 0.11
PLOD3O60568 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.71■□□□□ 0.11
PLOD3O60568 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PLOD3O60568 HCG4-201ENST00000418983 998 ntBASIC15.71■□□□□ 0.11
PLOD3O60568 PMS2P1-201ENST00000431037 1228 ntBASIC15.71■□□□□ 0.11
PLOD3O60568 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.71■□□□□ 0.11
PLOD3O60568 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.71■□□□□ 0.11
PLOD3O60568 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.71■□□□□ 0.11
PLOD3O60568 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
PLOD3O60568 AL121894.2-201ENST00000602977 491 ntBASIC15.71■□□□□ 0.11
PLOD3O60568 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.71■□□□□ 0.11
PLOD3O60568 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PLOD3O60568 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.71■□□□□ 0.11
PLOD3O60568 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.71■□□□□ 0.11
PLOD3O60568 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
PLOD3O60568 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PLOD3O60568 HLA-A-202ENST00000376806 1854 ntBASIC15.71■□□□□ 0.11
PLOD3O60568 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.71■□□□□ 0.11
PLOD3O60568 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PLOD3O60568 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PLOD3O60568 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.71■□□□□ 0.1
PLOD3O60568 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PLOD3O60568 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
PLOD3O60568 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.71■□□□□ 0.1
PLOD3O60568 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
PLOD3O60568 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PLOD3O60568 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PLOD3O60568 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PLOD3O60568 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.7■□□□□ 0.1
PLOD3O60568 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.7■□□□□ 0.1
PLOD3O60568 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.7■□□□□ 0.1
PLOD3O60568 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PLOD3O60568 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PLOD3O60568 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
PLOD3O60568 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PLOD3O60568 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms