Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDH7O60245 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDH7O60245 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH7O60245 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDH7O60245 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDH7O60245 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCDH7O60245 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDH7O60245 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH7O60245 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH7O60245 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCDH7O60245 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.9■□□□□ 0.14
PCDH7O60245 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDH7O60245 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDH7O60245 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH7O60245 AC108751.1-201ENST00000490852 363 ntBASIC15.9■□□□□ 0.14
PCDH7O60245 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDH7O60245 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDH7O60245 KRT126P-201ENST00000549467 1181 ntBASIC15.9■□□□□ 0.14
PCDH7O60245 AL160237.2-201ENST00000556165 472 ntBASIC15.9■□□□□ 0.14
PCDH7O60245 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.9■□□□□ 0.14
PCDH7O60245 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDH7O60245 MIR4751-201ENST00000578027 74 ntBASIC15.9■□□□□ 0.14
PCDH7O60245 AC104692.2-201ENST00000603054 253 ntBASIC15.9■□□□□ 0.14
PCDH7O60245 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PCDH7O60245 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH7O60245 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH7O60245 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
PCDH7O60245 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDH7O60245 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCDH7O60245 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH7O60245 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH7O60245 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH7O60245 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDH7O60245 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDH7O60245 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
PCDH7O60245 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PCDH7O60245 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
PCDH7O60245 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDH7O60245 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PCDH7O60245 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PCDH7O60245 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH7O60245 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH7O60245 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH7O60245 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH7O60245 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH7O60245 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH7O60245 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PCDH7O60245 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH7O60245 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.89■□□□□ 0.13
PCDH7O60245 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDH7O60245 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH7O60245 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.89■□□□□ 0.13
PCDH7O60245 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH7O60245 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PCDH7O60245 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PCDH7O60245 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDH7O60245 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDH7O60245 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDH7O60245 GPAA1P2-202ENST00000606848 1787 ntBASIC15.89■□□□□ 0.13
PCDH7O60245 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH7O60245 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.89■□□□□ 0.13
PCDH7O60245 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH7O60245 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH7O60245 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH7O60245 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDH7O60245 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.89■□□□□ 0.13
PCDH7O60245 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDH7O60245 AC012569.1-201ENST00000591191 1524 ntBASIC15.89■□□□□ 0.13
PCDH7O60245 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH7O60245 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDH7O60245 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH7O60245 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDH7O60245 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH7O60245 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 AC046158.3-201ENST00000624947 2558 ntBASIC15.88■□□□□ 0.13
PCDH7O60245 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH7O60245 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH7O60245 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PCDH7O60245 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH7O60245 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms