Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.62□□□□□ -0.23
SSSCA1O60232 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.62□□□□□ -0.23
SSSCA1O60232 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.62□□□□□ -0.23
SSSCA1O60232 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.62□□□□□ -0.23
SSSCA1O60232 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.62□□□□□ -0.23
SSSCA1O60232 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.62□□□□□ -0.23
SSSCA1O60232 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.62□□□□□ -0.23
SSSCA1O60232 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.62□□□□□ -0.23
SSSCA1O60232 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SSSCA1O60232 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SSSCA1O60232 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 ATP5G1P1-201ENST00000448724 379 ntBASIC13.62□□□□□ -0.23
SSSCA1O60232 GUSBP12-201ENST00000513727 720 ntBASIC13.62□□□□□ -0.23
SSSCA1O60232 VENTXP5-201ENST00000523979 775 ntBASIC13.62□□□□□ -0.23
SSSCA1O60232 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.62□□□□□ -0.23
SSSCA1O60232 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.62□□□□□ -0.23
SSSCA1O60232 RNF126P1-202ENST00000569893 925 ntBASIC13.62□□□□□ -0.23
SSSCA1O60232 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.62□□□□□ -0.23
SSSCA1O60232 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.62□□□□□ -0.23
SSSCA1O60232 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.62□□□□□ -0.23
SSSCA1O60232 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.62□□□□□ -0.23
SSSCA1O60232 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.62□□□□□ -0.23
SSSCA1O60232 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.62□□□□□ -0.23
SSSCA1O60232 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SSSCA1O60232 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.61□□□□□ -0.23
SSSCA1O60232 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SSSCA1O60232 AC002310.6-201ENST00000624451 1377 ntBASIC13.61□□□□□ -0.23
SSSCA1O60232 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.61□□□□□ -0.23
SSSCA1O60232 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.61□□□□□ -0.23
SSSCA1O60232 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.61□□□□□ -0.23
SSSCA1O60232 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.61□□□□□ -0.23
SSSCA1O60232 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
SSSCA1O60232 LIN28AP1-201ENST00000429574 405 ntBASIC13.61□□□□□ -0.23
SSSCA1O60232 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.61□□□□□ -0.23
SSSCA1O60232 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.61□□□□□ -0.23
SSSCA1O60232 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.61□□□□□ -0.23
SSSCA1O60232 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SSSCA1O60232 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.61□□□□□ -0.23
SSSCA1O60232 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SSSCA1O60232 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.61□□□□□ -0.23
SSSCA1O60232 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.61□□□□□ -0.23
SSSCA1O60232 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SSSCA1O60232 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.61□□□□□ -0.23
SSSCA1O60232 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.61□□□□□ -0.23
SSSCA1O60232 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.61□□□□□ -0.23
SSSCA1O60232 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSSCA1O60232 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SSSCA1O60232 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.6□□□□□ -0.23
SSSCA1O60232 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SSSCA1O60232 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
SSSCA1O60232 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSSCA1O60232 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms