Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HOXA2O43364 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXA2O43364 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HOXA2O43364 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HOXA2O43364 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA2O43364 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA2O43364 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA2O43364 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HOXA2O43364 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXA2O43364 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
HOXA2O43364 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA2O43364 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA2O43364 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HOXA2O43364 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA2O43364 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HOXA2O43364 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.65■□□□□ 0.42
HOXA2O43364 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.65■□□□□ 0.42
HOXA2O43364 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXA2O43364 AC061975.2-201ENST00000581722 295 ntBASIC17.65■□□□□ 0.42
HOXA2O43364 AC004840.1-201ENST00000636359 365 ntBASIC17.65■□□□□ 0.42
HOXA2O43364 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA2O43364 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA2O43364 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXA2O43364 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA2O43364 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXA2O43364 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA2O43364 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA2O43364 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA2O43364 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
HOXA2O43364 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA2O43364 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA2O43364 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.64■□□□□ 0.42
HOXA2O43364 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
HOXA2O43364 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
HOXA2O43364 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXA2O43364 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXA2O43364 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 AC098614.1-201ENST00000368528 745 ntBASIC17.64■□□□□ 0.41
HOXA2O43364 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXA2O43364 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.64■□□□□ 0.41
HOXA2O43364 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXA2O43364 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXA2O43364 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXA2O43364 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA2O43364 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HOXA2O43364 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA2O43364 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA2O43364 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA2O43364 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HOXA2O43364 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 AC068880.1-201ENST00000507289 2297 ntBASIC17.63■□□□□ 0.41
HOXA2O43364 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA2O43364 HLA-J-202ENST00000469281 1241 ntBASIC17.63■□□□□ 0.41
HOXA2O43364 AC093004.1-201ENST00000508850 424 ntBASIC17.63■□□□□ 0.41
HOXA2O43364 AC010336.2-201ENST00000564226 506 ntBASIC17.63■□□□□ 0.41
HOXA2O43364 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA2O43364 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA2O43364 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA2O43364 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA2O43364 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HOXA2O43364 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
HOXA2O43364 KRT8P12-202ENST00000472924 1397 ntBASIC17.63■□□□□ 0.41
HOXA2O43364 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HOXA2O43364 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA2O43364 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA2O43364 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms